Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3848 ATGGCTTCTCTTCATCATCACCCTCTTCCATATTCTGAAGCCAAACCCAACAATTCAATTGTTCTAGAGATTCATCAGGATGAGACCATCACTACTACTAGTGCTGTGGCACATATGGAGGAGGTTTCAAGAAAGAGCAATGGAGAAGAGAAGAGCAATCCTATCTGTTTGACATGGAAGGATCTTTGGGTGAATGCTTCCATGGGGAAGAAAGGGACCAAAGCTATCCTTCAGGGGCTAACCGGTTATGCCAAACCGGGTCAGCTCTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCAACACTTCTTGATACTTTAGCAGGTAGATTGGGTTCAAACACAAGACAAACTGGAGAGATTCTTGTCAATGGTCACAAACAATCACTGGCTTATGGAAGCACGGCATACGTGACACAAGATGATAGCTTAATAACATCATTAACAGTGAGAGAAGCAGTGTACTATTCAGCTCAGCTTCAGTTACCTGATTCCATGTCAAAGGCAGAGAAGAAAGAGAGAGCAGAGTTCACAATCAGAGAGATGGGTTTGCAAGATGCCATCAACACTAGAATTGGTGGCTGGGGTTGCAAAGGAATCAGCGGTGGTCAGAAGAGACGTGTAAGCATCTGCATTGAGATATTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCCTCTTACTATGTCATGAAAAGAATCAAATCCCTTGATCATAAAGATGGTATTCAAAGGACTATCATAGCGTCAATTCATCAACCAAGTGCTGAAGTTTTCCAATTCTTTGATAATCTCTGTTTGCTCTCTGCTGGAAAAACAGTTTACTTTGGACCTGCTTCTGATGCAATTCAGTTCTTCGCCTCAAATGGTTTTCCTTGTCCCTCTCTTCAAAATCCATCTGATCACTTGTTGAAAACTATAAACAAGGACTTTGATCAGGAAATGGAGGTAGGTTTAGCCGGGACGAGTGGAGGAGCATTACCGGCAGAAGCAGCAATCGGAATCCTTGTGAACGCATACAAAGCCTCAGAAATAAACGAACAAGTTCAAACGGAAGTAACTGCCATATCTAAAATGGAAATTAGGTACGTAGAGAAGAAGAGAGGACATGCAAGCTTCCTTAGGCAGTGCATTGTTCTTACAAAAAGATCATTTGTGAACATGTCCCGCGATCTAGGCTATTATTGGCTGCGCCTTGCTATATATATTGCCTTGGCTATAAGTTTAGCCACTATCTTCTATCATTTAGACACAAGTTATGCTTCAATTAAGGATAGAGGGTCACTTCTTGCATTTGTATCCACTTTCATAACTTTCATGAGCATTGGTGGATTCCCTTCCTTTGTGGAAGATATGAAGGTATTCGAAAGAGAAAGGCTAAATGGGCATTATGGTGTGAGTGCGTTTGTGATAGGAAATACCTTATCAGCCATCCCATTTGTGTTGCTAGTTTCTTTCATTCCGGGAGCTATAGCATACTACCTCCCTGGTCTCCAGAGTGGATGCGACCACTTCCTTTACTTCATTTGTGTTCTATTTTCTTGTCTCATGTTAGTGGAGAGCCTCATGATGATAGTTGCAAGCGTGGTTCCAAACTACCTAATGGGAATCATAACCGGCTCTGGAATCCAAGGCATCATGATCTTAGTTGCTGGCTTCTTCAAACTGCCAAGCACCATTCCTAAGCCATTTTGGAGATACCCTTTGCATTACATAGCATTCCACACTTATGCATTCCAAGGATTGTTCAAGAACGAATATGAAGGCTTGAAATTCCATGGAGGGTCATCACACAAGTACATTACGGGTGAAGAGATTATGAGGGACACGTGGCAAACAGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATATTAGTAGGGATGATTGGTGTGTATCGTGTTATGTTTTTGGTTATCATAAAGATTACTGAGAAGGTGAAGCCTATTGTTGGATCCTTCAAGCTGAGGTCTCCCAAACAAACAATTTATGTCGTCGAAAATCCCAATGCTACTCCTTTGCATGTGGAGCTTGTATGA 2064 0.4225 MASLHHHPLPYSEAKPNNSIVLEIHQDETITTTSAVAHMEEVSRKSNGEEKSNPICLTWKDLWVNASMGKKGTKAILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILVNGHKQSLAYGSTAYVTQDDSLITSLTVREAVYYSAQLQLPDSMSKAEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIKSLDHKDGIQRTIIASIHQPSAEVFQFFDNLCLLSAGKTVYFGPASDAIQFFASNGFPCPSLQNPSDHLLKTINKDFDQEMEVGLAGTSGGALPAEAAIGILVNAYKASEINEQVQTEVTAISKMEIRYVEKKRGHASFLRQCIVLTKRSFVNMSRDLGYYWLRLAIYIALAISLATIFYHLDTSYASIKDRGSLLAFVSTFITFMSIGGFPSFVEDMKVFERERLNGHYGVSAFVIGNTLSAIPFVLLVSFIPGAIAYYLPGLQSGCDHFLYFICVLFSCLMLVESLMMIVASVVPNYLMGIITGSGIQGIMILVAGFFKLPSTIPKPFWRYPLHYIAFHTYAFQGLFKNEYEGLKFHGGSSHKYITGEEIMRDTWQTDMSYSKWVDLAILVGMIGVYRVMFLVIIKITEKVKPIVGSFKLRSPKQTIYVVENPNATPLHVELV* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3848 687 CDD ABCG_EPDR 54 285 - -
Ahy3g3848 687 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 2 683 - -
Ahy3g3848 687 Pfam ABC-2 type transporter 260 322 IPR043926 GO:0140359
Ahy3g3848 687 Pfam ABC transporter 78 228 IPR003439 GO:0005524
Ahy3g3848 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 683 - -
Ahy3g3848 687 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524
Ahy3g3848 687 Pfam ABC-2 type transporter 383 595 IPR013525 GO:0016020|GO:0140359
Ahy3g3848 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 303 IPR003439 GO:0005524
Ahy3g3848 687 Gene3D - 56 317 IPR027417 -
Ahy3g3848 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 295 IPR027417 -
Ahy3g3848 687 SMART AAA_5 86 280 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3848 Ahy-Chr3 137874468 137879040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3848 87 240 Calmodulin-binding Proteins AT2G36910 30.303 1.23e-09 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4122 13 140723301 140729025 Ahy3g3848 3 137874468 137879040 hybridization