Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3847 ATGGCATCTGAAACCATGGTAGTAGAGATTGAGCATGATAATAATGATGATGAGAAGGGGAATAATAAGAGAAACGAAGAGAAAGAGGAGAAGGAGGGTATGTGTATGTGTATGACATGGAAGGATGTGTGGGTGACTGCATCAATGGGAAACAAAGGAAGCAAACCAATTCTTGCCGGTCTAACCGGTTATGCCAAACCGGGCCAGCTATTGGCCATAATGGGTCCTTCTGGTTCTGGCAAGTCTACCCTTCTTGATGCCTTAGCAGGTAGATTAGATTCAAACACAAGACAAACAGGAGAGATTCTCATCAACGGTCGCAAAGAAGCGCTGGCCTATGGAATCTCGGCATATGTGACACAAGATGATACCTTATTAACAACCTTAACGGTGAGGGAAGCAGTGCACTACTCAGCTCAACTCCAACTACCAGATTCCATGTCCAAGGCAGAGAAGAGAGAGAGAGCAGAGATTACAATAAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGAATTGGAGGTTGGGGCATTAAAGGAATCAGTGGTGGTCAGAAGAGACGTGTGAGCATCTGCATTGAGATCCTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCTTCCTATTATGTCATGAAAAGAATTGCAAACCTTGTTCAGAAAGATGGCATTCAAAGAACCGTTATTGCTTCAATACATCAACCAAGCACTGAAGTCTTTCAACTTTTCCATAACCTCTGTCTTATGTCTTCTGGTACAACTGTTTACTTTGGACCTGCCTCAACTGCTACTCAGTTTTTTGCTTCCAATGGTTTTCCATGTCCTGCACTCCAAAACCCTTCTGATCATTTACTGAAAACTATAAACAAGGATTTTGATCAGGATACTGACATGGGTTTATCTGGCACTAGAACAGTGCCTACAGAAGAAGCAATTAGAATCCTTATAAGCGCATATGAATCATCTGAAATTAAGCAACAAGTTCAACAAGAAGTTGCAATGCTATCTAACCAGGAGACTAGATCAGTAGATCATAAGAAGAGAAGGCGTGCTGGTTTCCTTAACCAGTGCATTGTTCTTACCAAAATATCATGCGTGAACATGTTTCGTGATCTAGGCTATTATTGGTTACGTCTTGGAATATACATTGCATTGGCCATAGCCACTGCCACAGTTTTCTATGATCTAGGTACAAGTTTCAGCACAATTCAGGACAGAGGAGCACTTCTTATGTTTGAATCTTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAGGTCATGAAGGTATTTGAACGAGAAAGATTAAATGGGCATTATGGTGTTGTGGCATTTGTAATTGGGAACACAGTATCTAGTGTGCCATACTTGGTTCTAGTATCAGTGATTCCAGGAGCCATGGCTTATTACCTTCCTCATCTTCAAAGAGGATTCGACCATTTTGTTTACTTCATATGTGTTCTGTTTTCTTGCCTCATGTTGGTTGAAAGCCTAATGATGATAGTTGCAAGCATAGTCCCAAACTATCTAATGGGAATCATAAGCGGCGCCGGAATCCAAGGAATCATGATGCTGGCCGGAGGGTTCTTCAGATTGCCCAATGATCTTCCTAAACCATTTTGGAGATACCCAATGTTCTATGTTGCATTTCATAGATTTGCATTCCAAGGATTGTACAAGAACGAGTTTCAAGGGCTAAGCTTTGCAACAAATGATGGAAATGGCTCCTACATTAGTGGTGATGAGATTCTCAGGGACACGTGGCAAGTTGACATGAGTTACTCCAAGTGGGTCGATCTTGGAATCTTGCTTGGGATGATTTTGGTGTATCGAGTGTTGTTCTTCTTGATCATCAAGATTACGGAGAAGTTGAAGCCATTTTTTGTGTCATTCATTTCAGGGTCTCCCAAGCGAGCAACACTAGTGATGGAGAATAATGATAACTCTGCACTAAGTCATCAAGCATAA 2004 0.4177 MASETMVVEIEHDNNDDEKGNNKRNEEKEEKEGMCMCMTWKDVWVTASMGNKGSKPILAGLTGYAKPGQLLAIMGPSGSGKSTLLDALAGRLDSNTRQTGEILINGRKEALAYGISAYVTQDDTLLTTLTVREAVHYSAQLQLPDSMSKAEKRERAEITIREMGLQDAINTRIGGWGIKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIANLVQKDGIQRTVIASIHQPSTEVFQLFHNLCLMSSGTTVYFGPASTATQFFASNGFPCPALQNPSDHLLKTINKDFDQDTDMGLSGTRTVPTEEAIRILISAYESSEIKQQVQQEVAMLSNQETRSVDHKKRRRAGFLNQCIVLTKISCVNMFRDLGYYWLRLGIYIALAIATATVFYDLGTSFSTIQDRGALLMFESSFITFMTIGGFPSFVEVMKVFERERLNGHYGVVAFVIGNTVSSVPYLVLVSVIPGAMAYYLPHLQRGFDHFVYFICVLFSCLMLVESLMMIVASIVPNYLMGIISGAGIQGIMMLAGGFFRLPNDLPKPFWRYPMFYVAFHRFAFQGLYKNEFQGLSFATNDGNGSYISGDEILRDTWQVDMSYSKWVDLGILLGMILVYRVLFFLIIKITEKLKPFFVSFISGSPKRATLVMENNDNSALSHQA* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3847 667 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 9 662 - -
Ahy3g3847 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 9 662 - -
Ahy3g3847 667 Pfam ABC-2 type transporter 364 575 IPR013525 GO:0016020|GO:0140359
Ahy3g3847 667 Gene3D - 23 279 IPR027417 -
Ahy3g3847 667 MobiDBLite consensus disorder prediction 1 31 - -
Ahy3g3847 667 SMART AAA_5 67 256 IPR003593 -
Ahy3g3847 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 284 IPR003439 GO:0005524
Ahy3g3847 667 MobiDBLite consensus disorder prediction 9 31 - -
Ahy3g3847 667 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Ahy3g3847 667 Pfam ABC-2 type transporter 241 297 IPR043926 GO:0140359
Ahy3g3847 667 Pfam ABC transporter 62 209 IPR003439 GO:0005524
Ahy3g3847 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 275 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3847 Ahy-Chr3 137864703 137869786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3847 68 245 Calmodulin-binding Proteins AT2G36910 30.645 1.06e-11 66.6