Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3827 ATGGCTGACGTCAAGTGCTATGTTCCACCTAATCAACTTAGTGGTTCACTTTTCCTGTTTGATCGGAAGGTGCTGAGATACTTTAGAAAAGATGGCCACAACTGGAGAAAGAAAAAGGATGGAAAAACAGTGAGGGAAGCTCATGAGAGACTTAAGGCTGGAAGTGTGGATGTGTTGCACTGCTATTATGCACACGGAGAAGAAAATGAAAATTTTCAAAGACGCACATACTGGATGCTTGATGAGGAACTCTCGCACATTGTTCTTGTCCATTATAGGGAAGTGAAGGCAACTAAGGCAAATTTTAGAGGTGCTGCCAAAGAAAATCAAGAATCTCTTCCTTATGCACAAATTGACAAACTACCAGGTTCCACGGAGAAGGAAATTTCTTTATCATGTAGTCTTCATCCACATAACTACCAGGTTCCATCACATACAATAGATACAACAAGCATGAAGAGCACTCAAGCAACAGAATATGAAGAAGCTGAGTCAGTGTTTACAGCATTGAATAGTTACGCAAGTTCAGAAGACTACTCCTTCCTTGAAACACAACACCCAGTTGTTGAGAAGATTCCTGATCCTTATTGCCTGCTGCAGTTCATAAATGAACAAGAGAAGTTGTGTGGCACTCCTGGGATGAATCATATCATGCTCAGTCAAGCTGGCAAAATCAAAGACATTCATAATGTTAGATTGGCATATGAACCCCCACAGCACGTTGGCTTTTCAATGTGGGAAAATATCTTGGAAAATAATGGGAGAAGTCAATACATGCCTCTTCAATCCATACTCCCTGAAATCCAACCTGATAACATGGGAATCAATAGCAATGCCTCTCTATTGAGGTCAAATTCCACCACCAATATTACCAAAGTGAATGGGACAGAAAATATGGTACAAGTTGAAGGAAATTGGCAGGTAATGAATGAGTTATATGAATTTGATCCTCAAAGATCCTTGGAACAGTGTCTTATACATCAAGATAAACCAAAGGTTCTTATGATAGATGACCCTCAAGAAAAACTATTAGATGCAAAAGAGAAGATAGAAACCAATAGAAGCCTGGATGGAATAGATGATACAAATTTAACTCTAAAGAAGGCTCTGTTAGATGGATCCCTTGCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAACTTGGAGATGTGGAAGAATCTAAAACTCCATCCACTTTTAGTGCTTATTGGGGTACAGTTGAAAGTGAAAACGATGTGGACAATGCAACTATTCCTTCCGAAGTGCACCTGGATACCTATGCACTGGATCCATCTATTTCCCATGATCAACTTTTTACCATTATTGACTTTTCCCCAAGCTGGGCATTTGAAGGCTCAGAAATTAAGATTCTCATTTATGGACAATTCTTGAGGAGTCTACAGGAAGCAGAACAATGTAAATGGTCTTGCATGTTCGGTGAGGTAGAAGTGCCAGCTAATATCATTGACAATGGTGTTCTTTCTTGTTATACTCCTCCACACAAAACTGGGAGGATTCCTTTCTATGTAACTTGTTCCAATAGGTTAGCATGTAGTGAAATACGAGAATTTGATTTCCGAGACATTTACACTCAAGAAGTCAACAATGCAGCTGAGCAGAGAGAGAGCATTTCTGATAATTTCAGTGTGCGATTTGAAGAGCTGCTGTACATTGGGCATACCTTACCTCAAAACTTAGATCCAATCTGCGTAAGTGAGAAATCTGAACTGAGAAGTAAAATAAGTGCTTTGCTGAGGAAGGAGGAGGATGATTGGGATAAGTTGCTGAAACTCACTCTAGAGAAAGATTTTTCTCCACAAAATGTACAGGAGCAGCTGCTTCAAAATCTTTTGAAAGATAAGTTACTTCGGTGGCTCCTTCAAAAAGTCATTGAAGATGGGAAAGGCCCTAATGTATTGGATGAGGGTGGCCAAGGAGTACTTCATCTTGCGGCTGCTCTTGGCTATGATTGGGCCTTACAACCCACAGTAATTGCTGGTGTAAATGTGAACTTCCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCTGCATTCTGTGGCAGGGAGCTCACAGTTGCTTCCCTCATCTCTCTTGGCGCAGCACCTGGGGCGCTGACTGATCCAAGCCCAGAGCATCCTTCTGGTAGAACACCAGCTGACCTGGCTTCCGCAAACGGTCACAAAGGAATTGCAGGGTATCTTGCAGAATCTTCAATAAGCGTGCAACTATTATCTCTTGATATGAACAGGGACACGAGAGAAAGTTCTGGATCAAAAGTAGTATACAGGGTCCAACACAATACTACTGAAGTTAATGATGATCACCTATCATATGAACTGTCACTGAAAGATTCACTGGCAGCAGTGTGTAATGCCAGCCAGGCTGCTGCACGTATTCATGAAGTTTATAGAGTGCAATCTTTCCAAAGAAAACAACTGAAAGAATATGATGATAAATTTGGAATATCTGATGAAGATGCTCTTTCTCTTATAACTGTAAAACCACACAAGGTTGGACAACGCAATGAGCCTGTACATGCAGCTGCAATACGAATCCAGAACAAATTCCGCAGTTGGAAGGGCAGAAAAGAATTTTTGATGATTCGCCAAAGAATAGTTAAAATTCAGGCTCATGTAAGGGGGCACCAGGTTAGGAAGAACTGTGGAAAGATAATTTGGTCAGTTGGAATTTTAGAAAAAGTTATTTTGCGCTGGCGCCGAAAAGGTAGTGGTTTACGTGGATTTAAATTGGAAGATGTTCCCGAGGGAACTATGGTACAAGATACACAGTGCAAGGAGGATGAGTATGATTTCTTGAAAGAAGGCAGAAAGCAAACAGAGGAAAGGTTGCAGAAAGCCCTATCCAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGAGACCAATACCATAGGCTGTTGAATGTTGTAACTGAGACCCAAGAAAACCAGCTAAAACATCATAGGAGTTCAGAAGAGAGAAGAGAATTTGATAACCTCATTGATCTTGAAACTTTGCTGGACGAGGATACTTTCATGCTTACAGTCATTTAG 3075 0.4104 MADVKCYVPPNQLSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRRTYWMLDEELSHIVLVHYREVKATKANFRGAAKENQESLPYAQIDKLPGSTEKEISLSCSLHPHNYQVPSHTIDTTSMKSTQATEYEEAESVFTALNSYASSEDYSFLETQHPVVEKIPDPYCLLQFINEQEKLCGTPGMNHIMLSQAGKIKDIHNVRLAYEPPQHVGFSMWENILENNGRSQYMPLQSILPEIQPDNMGINSNASLLRSNSTTNITKVNGTENMVQVEGNWQVMNELYEFDPQRSLEQCLIHQDKPKVLMIDDPQEKLLDAKEKIETNRSLDGIDDTNLTLKKALLDGSLAEEGLKKLDSFNQWMSKELGDVEESKTPSTFSAYWGTVESENDVDNATIPSEVHLDTYALDPSISHDQLFTIIDFSPSWAFEGSEIKILIYGQFLRSLQEAEQCKWSCMFGEVEVPANIIDNGVLSCYTPPHKTGRIPFYVTCSNRLACSEIREFDFRDIYTQEVNNAAEQRESISDNFSVRFEELLYIGHTLPQNLDPICVSEKSELRSKISALLRKEEDDWDKLLKLTLEKDFSPQNVQEQLLQNLLKDKLLRWLLQKVIEDGKGPNVLDEGGQGVLHLAAALGYDWALQPTVIAGVNVNFRDVNGWTALHWAAFCGRELTVASLISLGAAPGALTDPSPEHPSGRTPADLASANGHKGIAGYLAESSISVQLLSLDMNRDTRESSGSKVVYRVQHNTTEVNDDHLSYELSLKDSLAAVCNASQAAARIHEVYRVQSFQRKQLKEYDDKFGISDEDALSLITVKPHKVGQRNEPVHAAAIRIQNKFRSWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWSVGILEKVILRWRRKGSGLRGFKLEDVPEGTMVQDTQCKEDEYDFLKEGRKQTEERLQKALSRVKSMVQYPEARDQYHRLLNVVTETQENQLKHHRSSEERREFDNLIDLETLLDEDTFMLTVI* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3827 1024 Gene3D Immunoglobulins 440 535 IPR013783 -
Ahy3g3827 1024 Gene3D - 608 754 IPR036770 -
Ahy3g3827 1024 ProSiteProfiles IQ motif profile. 875 899 IPR000048 GO:0005515
Ahy3g3827 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 844 901 IPR027417 -
Ahy3g3827 1024 Pfam Ankyrin repeats (3 copies) 654 748 IPR002110 GO:0005515
Ahy3g3827 1024 Pfam IQ calmodulin-binding motif 853 872 IPR000048 GO:0005515
Ahy3g3827 1024 Pfam IQ calmodulin-binding motif 877 894 IPR000048 GO:0005515
Ahy3g3827 1024 SMART iq_5 851 873 IPR000048 GO:0005515
Ahy3g3827 1024 SMART iq_5 874 896 IPR000048 GO:0005515
Ahy3g3827 1024 Coils Coil 943 963 - -
Ahy3g3827 1024 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 10 990 - -
Ahy3g3827 1024 SUPERFAMILY E set domains 446 532 IPR014756 -
Ahy3g3827 1024 Gene3D - 850 898 - -
Ahy3g3827 1024 SMART ANK_2a 682 711 IPR002110 GO:0005515
Ahy3g3827 1024 SMART ANK_2a 721 750 IPR002110 GO:0005515
Ahy3g3827 1024 Pfam IPT/TIG domain 446 522 IPR002909 -
Ahy3g3827 1024 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 10 990 - -
Ahy3g3827 1024 SUPERFAMILY Ankyrin repeat 633 745 IPR036770 -
Ahy3g3827 1024 SMART CG_1_2 1 96 IPR005559 GO:0003677
Ahy3g3827 1024 ProSiteProfiles Ankyrin repeat profile. 682 714 IPR002110 GO:0005515
Ahy3g3827 1024 Pfam CG-1 domain 9 94 IPR005559 GO:0003677
Ahy3g3827 1024 ProSiteProfiles IQ motif profile. 853 881 IPR000048 GO:0005515
Ahy3g3827 1024 ProSiteProfiles CG-1 DNA-binding domain profile. 1 101 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3827 Ahy-Chr3 137682188 137688341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3827 19 1021 CAMTA Transcription Factor Family AT2G22300 48.263 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy3g3827 Ank_2 8.30E-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3827 K21596 - gmx:100798875 1410.59