Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3809 ATGGAACGTTACGAGGTAATCAGAGATCTCGGTTCAGGGAACTTCGGTGTAGCAAAGCTTGTTAGAGAGAAATGCAGTGGTGACTTCTATGCTGTCAAGTTCATTGAGAGAGGCCTCAAGATTGATGAGCACGTGCAGAGGGAGATCATCAACCATAGGTCCTTAAAGCATCCCAATATCGTTAGGTTCAAAGAGGTGCTACTTACTCCAACACATCTTGCCATAGTGATGGAATATGCTGCTGGAGGAGAACTATTCGAAAGAATATGTAGTGCTGGAAGATTCAGCGAGGACGAGGCAAGATATTTCTTCCAGCAGTTGATTTCTGGAGTCAGTTATTGCCATGCAATGGAAATTTGCCATAGAGATCTCAAGCTGGAAAACACACTTTTAGATGGAAGCACAGCACCAAGGCTTAAAATATGCGACTTTGGTTACTCAAAGGCAAGAAACTTGTTACATAATTTCAATGAACATGTTTCATGTTTCACTCAGAAACCCTCTAACATTGTTTTTTATTTTTCCATCTTGTTTCAGTCTTCTGTTCTGCACTCGCAGCCAAAATCCACTGTAGGAACCCCTGCATATATTGCTCCAGAGGTCTTGTCAAGAAGAGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACCTTGTATGTGATGCTCGTTGGTGCTTATCCTTTCGAAGACCCAGAAAACCCAAGAAACTTCAGAAAAACTCTCCAGCGAATTCTGAGTGTCCACTATTCTATTCCAGACTATGTTCGTATAAGCAAAGAGTGTAGACACCTTCTATCTCTAATATTTGTTGCCAACCCTGAAAAGAGAATTACCATACCAGAGATAAAGATGCTACCATGGTTCCAACAGAACCTACCACTAGAATTCACGGATGAGGGTGCAGGTAGCCTGCAAAATGGTGGTGGGAACCATGATGATGATAGTTCAGTTCAGAATATTGAAGAAATATTATCAATAGTACAAGAGGCTAGGAAGCCAAGTGAGGATAACCCAGAAGAAGCTGGTGGGCAGTTTGTTGGGGGCAGCATGGACCTTGATGATATTGATGTAGATGCTGACATGGATGATATTGAAACAAGTGATGATTTCGTCTGTACTTTGTGA 1134 0.4198 MERYEVIRDLGSGNFGVAKLVREKCSGDFYAVKFIERGLKIDEHVQREIINHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHAMEICHRDLKLENTLLDGSTAPRLKICDFGYSKARNLLHNFNEHVSCFTQKPSNIVFYFSILFQSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPENPRNFRKTLQRILSVHYSIPDYVRISKECRHLLSLIFVANPEKRITIPEIKMLPWFQQNLPLEFTDEGAGSLQNGGGNHDDDSSVQNIEEILSIVQEARKPSEDNPEEAGGQFVGGSMDLDDIDVDADMDDIETSDDFVCTL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3809 377 PANTHER SERINE/THREONINE KINASE 2 156 - -
Ahy3g3809 377 Pfam Protein kinase domain 4 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3809 377 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy3g3809 377 MobiDBLite consensus disorder prediction 333 352 - -
Ahy3g3809 377 SUPERFAMILY Protein kinase-like (PK-like) 1 296 IPR011009 -
Ahy3g3809 377 CDD STKc_SnRK2 3 290 - -
Ahy3g3809 377 PANTHER SERINE/THREONINE KINASE 179 371 - -
Ahy3g3809 377 Gene3D Transferase(Phosphotransferase) domain 1 80 298 - -
Ahy3g3809 377 SMART serkin_6 4 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3809 377 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 179 371 - -
Ahy3g3809 377 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 156 - -
Ahy3g3809 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Ahy3g3809 377 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Ahy3g3809 377 ProSiteProfiles Protein kinase domain profile. 4 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3809 Ahy-Chr3 137565419 137568237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3809 3 299 CBL-interacting serine-threonine protein kinases AT5G25110 39.934 5.10e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ahy3g3809 Pkinase 8.10E-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3809 K14498 - gmx:100807981 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4086 13 140421230 140424247 Ahy3g3809 3 137565419 137568237 hybridization