Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3805 ATGCATTCAGTCTGGAATGCCGGTGACCGCCATGGAAACATAGACAAGCGAACCTACACTTTGAAGCATAAACATTATGAAGATTTTCAACACATCTTTGAGGCATGTTCTATTGGAGATCAATTAGAACAAGTGTCGTTATTAGAGAAAGAACTGGACAGGTATTATAACAATTCGATGTATGCACCATTCGAAGAAGAAGGGGTCGTCGAGGAGAATGCAGCGAGCGATGGAGATGATTTCGAGGGGGTTGGGGGACATTCGGCTGAGTCAGGTGCAGAAGGCATTGACGATGATGTATACGGTGATGGTTTTTATGACAACTGGGAAGAAAGGGGAATTGATAGGCTGACTGATCTGGGTTGTATGAATTTGAAAGAAATTAGGGCCGATCATATTAAAATGTTACATTTTGCAGACCGGGAAGTTGCTTTTGCTTTCTATAACCTATATGCAAAGATGAACGGGTTTGCCGCAAGAAGGTACCGGTCGCGGCGGAACATGAACAACGAGGTTACACAACAGTCCTTTGTTTGCTTTAGGCAGGGATTTAGAAAGCACAATGATTGTGAAGAACGTAAAAGGGAACCAAAGCCAGAGACTAGATGTGGTTGTGAGGCTGAGATGCGTGTACATGTACACAGGGAAAGTGGAAGATGGATCATAATCTATTTTCAGGAAGTTCATAATCACAAGATGCTTGAGGACACACTAACTTTTATGCTTCCCGGACACAGGATGATGAACGCGGCAGCTATTAATCAGATGAATATGATGCTTAAGGTCGGCATTAGGACTCCACAAATTTATGCATCATTTGTGCAAACCGCAGGAGGCCACGAAAATGTTCCGTTTTTGAAAAGAGATATGTACAACCAAATAGACAAACAAAGAAAGCTCATTGGCGGGGATGCAAAATCGTGTCTTAAGTTGTTAGAATCAATGGCAGAGCGGAACCCAGGAATGTTTGTAAGATACTTGGCAGATAAAGATGGGCGATTGGTTCACCTGTTTTGGTCAGACAATTGCAGTCAGCTAGATTTCCATCTTTTTGGGGATGTGTTAGCATTTGATGCAACATATCGTAAGAATAAGTACATGTGCCCACTTGTGGTTTTTTCCGGTGTAAACCATCATAATCAAACAATTGTATTTGCTGCAGCACTAGTTGCAAACGAGACGGAAGAAACATACACTTGGTTACTTCAGCAGTTTCTTGAAGCAATGAAAGGGAAGGCACCTGGATGTGTTATAACTGATGGTCACGGTGCAATGAAGAAGGCCATTGAAACTGTATTTCCAGGTGCTTATCATCGACTCTGTGCTTGGCATTTAATTAGGAATGCTACTTCAAATATTAGCAATCCAGTGTTTACATCTGAATTCAAAAAATGCATGTTATTTGACTATGAGGTATCTGAGTTTGAGGAAAGATGGCAGAAGGTTGTATCGGAACTTGGTCTCGAGACTAATCAGTGGGTGTGTGATCTTTATGCCAAGAGAGCAATGTGGGCCACTGCATATATCCGCGGACATTTTTTCGGTGGCTTCCGAACAACCTCAAGGTGTGAAGGTTTACATTCTATGCTTGGCAAGTTTGTACACTCTAGACATAACTTGAAGGACTTTGTGGAGCAGTTCTTTCGGTGCATATCTCAGATGAGGTCTCGGGAAGCACACACTGATTTGCAATCTATTGTTGGGGATTTGGTAATGCAGACACCATTGCATGCTCTTGAGAGATCGGCTGCAAATTCACTTACACGGGAAATTTTTCTATTGTTCAGGCCAATGCTTTCACGAGCTTGCACGTTGAAGGTTCGCTCCTGCACATACACACCTATGTGTAAGATTTATACACTTTCACGATCCGGAGATGCACAGCGAGAGTGGCAAGTCTCACATTATCCTAATGGAACTTTCTTTAAGTGTTCATGCATGAGGATGGAGTCATTGGGTATTCCATGTGATCACATTGTGGCGGTGGTCAAAGGATGCCAGGTCCAAAGTTAG 2013 0.4262 MHSVWNAGDRHGNIDKRTYTLKHKHYEDFQHIFEACSIGDQLEQVSLLEKELDRYYNNSMYAPFEEEGVVEENAASDGDDFEGVGGHSAESGAEGIDDDVYGDGFYDNWEERGIDRLTDLGCMNLKEIRADHIKMLHFADREVAFAFYNLYAKMNGFAARRYRSRRNMNNEVTQQSFVCFRQGFRKHNDCEERKREPKPETRCGCEAEMRVHVHRESGRWIIIYFQEVHNHKMLEDTLTFMLPGHRMMNAAAINQMNMMLKVGIRTPQIYASFVQTAGGHENVPFLKRDMYNQIDKQRKLIGGDAKSCLKLLESMAERNPGMFVRYLADKDGRLVHLFWSDNCSQLDFHLFGDVLAFDATYRKNKYMCPLVVFSGVNHHNQTIVFAAALVANETEETYTWLLQQFLEAMKGKAPGCVITDGHGAMKKAIETVFPGAYHRLCAWHLIRNATSNISNPVFTSEFKKCMLFDYEVSEFEERWQKVVSELGLETNQWVCDLYAKRAMWATAYIRGHFFGGFRTTSRCEGLHSMLGKFVHSRHNLKDFVEQFFRCISQMRSREAHTDLQSIVGDLVMQTPLHALERSAANSLTREIFLLFRPMLSRACTLKVRSCTYTPMCKIYTLSRSGDAQREWQVSHYPNGTFFKCSCMRMESLGIPCDHIVAVVKGCQVQS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3805 670 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 137 662 IPR031052 GO:0006355
Ahy3g3805 670 Pfam MULE transposase domain 354 448 IPR018289 -
Ahy3g3805 670 ProSiteProfiles Zinc finger SWIM-type profile. 619 667 IPR007527 GO:0008270
Ahy3g3805 670 PANTHER OS02G0262500 PROTEIN 137 662 - -
Ahy3g3805 670 SMART 26again6 642 669 IPR006564 GO:0008270
Ahy3g3805 670 Pfam FAR1 DNA-binding domain 147 234 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3805 Ahy-Chr3 137499137 137501887 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g3805 MULE 4.30E-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3805 - - ahf:112783567 1389.4