Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3793 ATGTCCAAACCTTGGGGCAATATCGGAAACTGGGCGGCGGAAGCTGAACGGGCCGAAGCGGAGGAGCGGGAGGCCGCCGCCGCTGCCGCCGCCAACCCGCAGGGCTTCCCAAGCCTCAAGGAGGCCGTTAACGCGAAGCCTAAGAAGAAGAAGATGACGCTATCGGAGTTCGCAACCTATACTTCCGGTGGCGGTGGTGCGTTGGAGTCCAAACGCTTGACGCAGGACGAGATGCTCAGTCTCCCGACGGGGCCGAAGGAGCGGTCCGCAGACGAAATGCAGTACAACCGGCTCGGCGGCGGGTTCTCATCCTACGGTCGCTCCGGTGGGTCTTCGATGGGTCGCTCCAGGGACCGCGAAGGGAACGGCGAGGGTTCCTGGGGCGGAGGGAGGAGATCGTTCGGCGGATTGGAAGATGAGCGCAGGGGTCCGAGTCCTAGGGTTTCAGATATCGACCAACCTTCCAGGGCTGACGAGGTGGATAACTGGGCCTCGGGGAAGAAATTGCCCTCGTCTTTCGATTCCGGCCGGCAGAATAGATATAGTTCTCTTGGCAGCGGCGGAGGCGGTGGTGGCATTGGTGGCGGAGGCGGAGGTAGTGGATTTGGTGGTAGCTCTAGAGCTGACGAGGTAGATAATTGGACATTTGGAAAGAAGCCTGTTCCCGCCAGATCTTCAACTTTTGGTTCCGGTTTTCGCGATTCTGGCGGGGAGCAAGATCGCTGGTCGAGGGGACCACCACGAGGGGAGCAGTCGGATCGCTGGTCGAGGGGACCAGTGCGCGAGGAGCGGCCAAAGTTGGTGTTGGAACCACCGAGAGGCGATGCTTCTGCCAATGAAGTACCGGTGGTGAAAAGTAATAAGCCGAACCCTTTCGGTGCGGCGAGGCCGAGGGAGGAAGTTTTGGCAGAGAAAGGAGTGGATTGGAAGAAGCTGGAAACAGATTTGGATGCGAAGAAGTCTACTAGTCGGCCTTCGAGTGCACACTCCAGTAGGCCTTCCAGCGCCCAATCCAACCGCTCTGAAAGTCTCGGGCCTGCTGAAGCTGTGGCAAAGCCCAAACCCAAGGTGAATCCTTTTGGGGACGCCAAACCCAGGGAGCTTTTGCTGAGGGAGCGAGGTATTGATTGGCGGAAGGTTGATCTTGATTTGGAGCATCGCGCTGTTGACAGGCCTGAGACAGAGGAAGAAAAATTATTAAAAGAAGAAATTGATCGTTTGAGGAAGGAAGCTGAGAAAGAGTCTACTATAAATTCGAATAAAGAATCTTCAAATGAGACTGATGCAGAACAAAGCAGTACACAAGAAATATTATTGCAGAAAGAGAGGGAGCTTGAACATCTTATACGTGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCATCGGCAGGAAGGTCTGTTGTTTATTCTGATAGGCCACATTCTCGATCAAGCTCAATCTCAATTGAGGATTCTAGAGGTGAGTCTGCAGACAGACCTCAATCCCGTGGCACAAGTGATACATGGGCGGGTCCTAATGATGACCAAAGATCGTATCGAGGAAGCAAGGACAGGAGAGGGTTTTTGAGCAGCAGAGACGTGAATAGGTCAAGGTCAAGAGAGAGATGGTGA 1632 0.5435 MSKPWGNIGNWAAEAERAEAEEREAAAAAAANPQGFPSLKEAVNAKPKKKKMTLSEFATYTSGGGGALESKRLTQDEMLSLPTGPKERSADEMQYNRLGGGFSSYGRSGGSSMGRSRDREGNGEGSWGGGRRSFGGLEDERRGPSPRVSDIDQPSRADEVDNWASGKKLPSSFDSGRQNRYSSLGSGGGGGGIGGGGGGSGFGGSSRADEVDNWTFGKKPVPARSSTFGSGFRDSGGEQDRWSRGPPRGEQSDRWSRGPVREERPKLVLEPPRGDASANEVPVVKSNKPNPFGAARPREEVLAEKGVDWKKLETDLDAKKSTSRPSSAHSSRPSSAQSNRSESLGPAEAVAKPKPKVNPFGDAKPRELLLRERGIDWRKVDLDLEHRAVDRPETEEEKLLKEEIDRLRKEAEKESTINSNKESSNETDAEQSSTQEILLQKERELEHLIRDLDDKVRFGQKAVERPGSSAGRSVVYSDRPHSRSSSISIEDSRGESADRPQSRGTSDTWAGPNDDQRSYRGSKDRRGFLSSRDVNRSRSRERW* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3793 543 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 543 IPR010433 GO:0003743
Ahy3g3793 543 MobiDBLite consensus disorder prediction 237 270 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 298 322 - -
Ahy3g3793 543 Pfam Plant specific eukaryotic initiation factor 4B 1 525 IPR010433 GO:0003743
Ahy3g3793 543 MobiDBLite consensus disorder prediction 456 543 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 1 365 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 517 543 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 501 515 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 168 185 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 408 439 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 420 436 - -
Ahy3g3793 543 Coils Coil 394 417 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 323 344 - -
Ahy3g3793 543 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 543 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 484 500 - -
Ahy3g3793 543 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3793 Ahy-Chr3 137329648 137333550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3793 1 543 Eukaryotic Initiation Factors Gene Family AT3G26400 55.240 1.30e-145 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3793 - - aip:107631697 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4072 13 140184352 140188111 Ahy3g3793 3 137329648 137333550 hybridization