Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3790 ATGCTTGGTCAAGAGGGTACCGCCGACCGCTCTGCCGCTCCCGCCGCTCCTCGTATGCCATATTCCCGCTCAGCTTCCTGGAATGATCGCTCTCCGGCTACCCCAAGGCCGCCGCCGTCGGGAAATAAGCCGAGATCGCTGCTGCCGCCGCTTCAGCCTCTGGCCATCAGAAGGCGCGGCGCGGAGGAGTGGCCGAGCGCCGGATCTGACGATCTCGGCGTGTGGCCACTCCCGGAGACTCCAAGAGGGTCCGTGTCTGTGGTGGGGTCATCATCGGAGTTCCAGTTGAAGAGGGAGAAGCTGGCCTTCTACGACAAAGAGTGTTCTCGGATTGCGGAGCACGTGTACCTCGGGAGTGACACGGTGGCCAAGAACCATGACCTGCTCCGGCAGAACGGCATCACTCACGTGCTCAACTGTGTTGGCTTCGTTTGCCCTGAATATTTCAAGCGCGATTTTGTTTACAAGACTCTGTGGTTGCAGGACAGTCCCACAGAAGACATCACCAGCATCCTGTACGATGTTTTCGATTACTTTGAGGAGGTTAGGGAGCAAGGTGGGCGCGTGTTGGTTCACTGCTGCCAAGGGGTTTCGAGATCGACGTCTCTGGTGATCGCGTATCTGATGTGGAGGGAAGGGCAGAGCTTCGAGGACGCGTTTCAGTACGTGAAAAATGCGAGGGGTGTCACCAATCCTAACATGGGTTTTGCGTGTCAGTTATTGCAGTGTCAGAAACGGGTACATGCTACTCCCGCTAGTCCTAATTCCATTCTTCGGATGTATAGAATGGCTCCTCATTCACCTTATGATCCTCTTCATTTGGTTCCTAAGATTGTCAACCACCCCTCTGCACAGGCCCTTGATTCTCGTGGTGCTTTCATTGTGCATGTTCCTTCTGCTATTTATGTTTGGACAGGCAACAACTGCAATTCGGTTATGTCTTCTAATGCAAGAGGCGCGGCATCTCAGGTTGTTCGCTATGAGAGGGCTACGGCTCCTGTTCTTACCATCCATGAGTATGACGAGCCACCGGAGTTTTGGATTGCTCTTGCCTCTGCTGATTGTGACCAGCAGGAGAAGGAGGACACAACCTTGGAAGCTGTTCGTCCTAGGAAGCTTGATGAATATGATTTGGATTATGAGATTTTCCAAAAGGCACTTGCTGGCGGGGTTGTTCCACCTTTCTCTGTGTCTAATGCAGGCTCAGAGACCTGCCTTCCAGCCAGAGAAAGCGGTTGGGGGAGACTGCGCCGGAAACTCGCCAGCGGTTTCATCAAAGGATTGTTCACTTCATCCAAAAGGAACTCTACTAATGAAGAAGCTGCTCTTGTCATGGAAGATTTTGCTGTTAATGTTGATCCCAATGATTGCTCAGGCAGGGAAAAAGGTTATGTTGAAGTGTTGGATCATTTTGTTCCCATTACGGATGTGGATTCATCATTGCCAACATCATCAGATTATCTTCCTTGTTTCACGAGCAGCAGTTCCAAGTCACCAACGCTCTCGCCCTCCAGTTCTGATTATGCAAGTTCATTTACATTTTCACCTTCCTCAACAAATTTGTCTTCTCAGCAGCCATCACCTTCTACTTCTAGCATGGATTCAACCGAAACTATTTATGCCAAAGATGCTTCTGTATTGGACAGTTCCTCTCTGTTTCACAAGAAGGGTGATGTGTTTTTGGCTGATCAAACATCCGGAGGGTCCACCTTCTTTTTGCCATTGAAAGGGTCTATACCCTCCATTGCAGAGCGCAGAGGTAGTAATCCACCACCTCGCATGTTGCTACCTTCTTCAGTCACCGAGTCATCCCATCCTCACAGGAGCAAGATTCATGTAAGATCAAAGTCATTTTCTTTGCCGGAATTGGATGATAACTTGTTAAAGGATGTTGATTGCAAGCAAGCTGATCCTGCTTCATGTAAATAA 1929 0.5003 MLGQEGTADRSAAPAAPRMPYSRSASWNDRSPATPRPPPSGNKPRSLLPPLQPLAIRRRGAEEWPSAGSDDLGVWPLPETPRGSVSVVGSSSEFQLKREKLAFYDKECSRIAEHVYLGSDTVAKNHDLLRQNGITHVLNCVGFVCPEYFKRDFVYKTLWLQDSPTEDITSILYDVFDYFEEVREQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKNARGVTNPNMGFACQLLQCQKRVHATPASPNSILRMYRMAPHSPYDPLHLVPKIVNHPSAQALDSRGAFIVHVPSAIYVWTGNNCNSVMSSNARGAASQVVRYERATAPVLTIHEYDEPPEFWIALASADCDQQEKEDTTLEAVRPRKLDEYDLDYEIFQKALAGGVVPPFSVSNAGSETCLPARESGWGRLRRKLASGFIKGLFTSSKRNSTNEEAALVMEDFAVNVDPNDCSGREKGYVEVLDHFVPITDVDSSLPTSSDYLPCFTSSSSKSPTLSPSSSDYASSFTFSPSSTNLSSQQPSPSTSSMDSTETIYAKDASVLDSSSLFHKKGDVFLADQTSGGSTFFLPLKGSIPSIAERRGSNPPPRMLLPSSVTESSHPHRSKIHVRSKSFSLPELDDNLLKDVDCKQADPASCK* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3790 642 PANTHER MKPA PROTEIN 26 604 - -
Ahy3g3790 642 Gene3D Protein tyrosine phosphatase superfamily 85 249 IPR029021 -
Ahy3g3790 642 Gene3D Severin 259 357 IPR029006 -
Ahy3g3790 642 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 166 227 IPR000387 GO:0016311|GO:0016791
Ahy3g3790 642 CDD DSP 108 242 - -
Ahy3g3790 642 MobiDBLite consensus disorder prediction 516 536 - -
Ahy3g3790 642 SMART dsp_5 107 246 IPR020422 GO:0006470|GO:0008138
Ahy3g3790 642 ProSiteProfiles Dual specificity protein phosphatase domain profile. 107 249 IPR020422 GO:0006470|GO:0008138
Ahy3g3790 642 MobiDBLite consensus disorder prediction 32 46 - -
Ahy3g3790 642 MobiDBLite consensus disorder prediction 1 50 - -
Ahy3g3790 642 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 100 248 IPR029021 -
Ahy3g3790 642 SUPERFAMILY Actin depolymerizing proteins 253 351 - -
Ahy3g3790 642 MobiDBLite consensus disorder prediction 581 616 - -
Ahy3g3790 642 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 26 604 - -
Ahy3g3790 642 ProSitePatterns Tyrosine specific protein phosphatases active site. 191 201 IPR016130 GO:0016311|GO:0016791
Ahy3g3790 642 Pfam Dual specificity phosphatase, catalytic domain 115 245 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3790 Ahy-Chr3 137297632 137300166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3790 1 143 Protein tyrosine phosphatase (PTP) family AT3G55270 41.081 7.57e-34 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3790 - - lja:Lj6g3v0574850.1 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4069 13 140143559 140146069 Ahy3g3790 3 137297632 137300166 hybridization
Ahy3g3790 3 137297632 137300166 Ahy20g1088 20 17241600 17244858 PCT
Ahy3g3790 3 137297632 137300166 Ahy10g0795 10 10341079 10344620 PCT