Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3721 ATGATGAATGACCTTATGGGGCTTCTTAGGATTCACATCAAGCGTGGTGTGAATCTGGCGGTTCGTGATGTGAATACCAGTGACCCATACTGCGTGGTTAGGATGGGGAAGCAGAAACTCAAGACACGTGTCATAAAAAAGGATGTTAACCCCGAGTGGGATGAAGAGCTTACCCTTTCCGTACAAGATCCCAGCGTTCCGTTCACGCTGACTGTGTATGACCATGACACGTTCACGAAAGACGACCCCATGGGGGATGCAGAGTGTGACATACACCCCTTCATAGAAGCATTGAAGATGGACACCCAAGGCCTCCCATCGGGCACCATAATCACCCGAATACAGCCTGGCAGGCAAAACTGCCTTGCTGAGGAGAGCCGTATTACTCTCGTCGACGGCAAAATTGTCCAAGACATTGTCCTTAGATTGCGACACGTCGAATGTGGTGAGGTTGAACTCCAGTTGCAATGGATAAATATTCCTGGATCTGTCATGTGA 498 0.492 MMNDLMGLLRIHIKRGVNLAVRDVNTSDPYCVVRMGKQKLKTRVIKKDVNPEWDEELTLSVQDPSVPFTLTVYDHDTFTKDDPMGDAECDIHPFIEALKMDTQGLPSGTIITRIQPGRQNCLAEESRITLVDGKIVQDIVLRLRHVECGEVELQLQWINIPGSVM* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3721 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 163 IPR044562 -
Ahy3g3721 165 Pfam C2 domain 7 93 IPR000008 -
Ahy3g3721 165 CDD C2_ArfGAP 7 149 - -
Ahy3g3721 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 101 IPR035892 -
Ahy3g3721 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 2 163 - -
Ahy3g3721 165 Gene3D C2 domain 3 163 IPR035892 -
Ahy3g3721 165 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Ahy3g3721 165 SMART C2_3c 8 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3721 Ahy-Chr3 136574699 136575844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3721 39 162 C2H2 Transcription Factor Family AT1G70790 58.730 8.50e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3721 - - gmx:100799469 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3994 13 139390373 139391423 Ahy3g3721 3 136574699 136575844 hybridization
Ahy3g3721 3 136574699 136575844 Ahy15g2633 15 142153015 142155555 PCT
Ahy3g3721 3 136574699 136575844 Ahy5g2588 5 101801550 101804123 PCT
Ahy15g2633 15 142153015 142155555 Ahy3g3721 3 136574699 136575844 PCT
Ahy5g2588 5 101801550 101804123 Ahy3g3721 3 136574699 136575844 PCT