Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3687 ATGGATCGGGATTATGATATGAGGCAGCATTCCCTCCTGAAAGTTCCCGGGGCCAAGCTCCGCCTGATGTGCAGCTATGGAGGCAATATCATGCCACGCCCCCGCCCCCACAACAACCACGACTCTCTCTACTACGTGGGCGGCGACACCCGCATGGTGGCTGTGGAGCGTAACACCTCCCTGAAGGACCTCTGTGCTGGCCTCTCCAACACCCTTCTCCATGGACGTCCCTTCACCCTCAAGTACCAGCTCCCCGAGGAGCAACTTGACAACCTCATCACCGTGGCCACCGATGACGACCTCCAGAACATGATCCAAGAGTATGACCGCTTGGCTTCTTTCTCTCCTCCTCTGCGTCTCAGGGTCTTCCTCTTTGTCTCGAAACTAGACACGGCGGTTTCCATGGGTGCACTCCTGGACGATGCCAAGTCCGAGACGTGGTTCGTGGACGCTCTCAACAACTCGGGGATGATGAATAATATATCTCGTGTTGTTTCTGATTCTGCTGCTGTTGATGAATGCCTCCTCAGCCTTGCTGATGAAGTCCCAGTCCCACATAAAACGGAGCAGGAAGTTAATAAGCAGCATTTGGGTGATGGCAGCAGCAAGGTGATGGACGAGCATTTTGCACAACTCACGCTTGGTTTGCCTTCTCCTGATTCTGTTGCAAGTGATAGCAGCATTGCATCTGCAGCAAGTTGTTCAATCTCAAAGGGGCAGGGGTTTTATTATCAAGAACAACAAGTGGATCCAAATCAGAATCAGCAGCAGCAATTTGTGTACATCCAACCCCACACTCACAACACTGGACATGGACATGGACATGGACATGGACAACTGACAATACCATCCTACCACAACACAGTGTATGTAGTGCCAGTTGACATTTCACAAGTGGCAACTAATTACCCAACTATGCTAACTACCCCAACCAATGTACCTGACATGCCTTCAACTCATCCTGCATTTCTTCAAACACCTTCCAATCAATATCAGCAACAACGCTATGTGCCTTTGCCTCATCATCCAACTGCAGTTGCCACAACCAATTATGGGGGTGGACCTAAGCAAGACCAGCAACTAGTATATTACACACAAACGCAAACCCAGCAGCAGCAATCCAGTGCTCCACAACCCCTTCAGTACCAATCCATGATCCCAGCAGCCAAAGAGTTCCCTCTGTGA 1185 0.5055 MDRDYDMRQHSLLKVPGAKLRLMCSYGGNIMPRPRPHNNHDSLYYVGGDTRMVAVERNTSLKDLCAGLSNTLLHGRPFTLKYQLPEEQLDNLITVATDDDLQNMIQEYDRLASFSPPLRLRVFLFVSKLDTAVSMGALLDDAKSETWFVDALNNSGMMNNISRVVSDSAAVDECLLSLADEVPVPHKTEQEVNKQHLGDGSSKVMDEHFAQLTLGLPSPDSVASDSSIASAASCSISKGQGFYYQEQQVDPNQNQQQQFVYIQPHTHNTGHGHGHGHGQLTIPSYHNTVYVVPVDISQVATNYPTMLTTPTNVPDMPSTHPAFLQTPSNQYQQQRYVPLPHHPTAVATTNYGGGPKQDQQLVYYTQTQTQQQQSSAPQPLQYQSMIPAAKEFPL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3687 394 PANTHER OS05G0427100 PROTEIN-RELATED 210 259 - -
Ahy3g3687 394 CDD PB1_UP2 23 125 - -
Ahy3g3687 394 Gene3D - 44 126 - -
Ahy3g3687 394 PANTHER OS05G0427100 PROTEIN-RELATED 9 201 - -
Ahy3g3687 394 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 201 - -
Ahy3g3687 394 SMART PB1_new 38 125 IPR000270 GO:0005515
Ahy3g3687 394 SUPERFAMILY CAD & PB1 domains 41 135 - -
Ahy3g3687 394 Pfam PB1 domain 43 126 IPR000270 GO:0005515
Ahy3g3687 394 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 210 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3687 Ahy-Chr3 136176085 136177664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3687 19 154 MAP Kinase Kinase Kinase AT5G57610 40.146 6.04e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3687 - - ahf:112783394 702.975