Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3677 ATGGCGCAGCAACCACTGGAGCAAGTGCAGTGCTTCGGCCGCAAGAAGACTGCGGTGGCCGTCACATACTGCAAGAGAGGACGCGGCCTCATCAAGATCAACGGTTGCCCAATCGAGCTTGTGGAGCCGGAGATCCTGCGGTTCAAGGCGTTCGAGCCAATCCTGCTGCTCGGAAGGCACCGATTCGCCGGCGTTGACATGCGCATCCGCGTGAAGGGAGGAGGACACACTTCTCAGATCTACGCCATAAGGCAGAGCATAGCGAAGGCTCTTGTTGCGTTCTACCAGAAGTATGTGGACGAGCAGAGCAAGAAGGAGATCAAGGACATTCTTGTCAGGTACGACCGAACCCTCCTCGTCGCCGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGCGGTGCTCGTGCTAGGTTCCAGAAGTCCTACCGTTAA 438 0.5776 MAQQPLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3677 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
Ahy3g3677 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Ahy3g3677 145 Gene3D - 1 145 IPR014721 -
Ahy3g3677 145 PANTHER RIBOSOMAL PROTEIN S9 4 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Ahy3g3677 145 PANTHER - 4 145 - -
Ahy3g3677 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3677 Ahy-Chr3 136087162 136087855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3677 1 145 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.356 5.75e-94 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3677 K02960 - mnt:21383843 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3951 13 138874510 138875223 Ahy3g3677 3 136087162 136087855 hybridization