Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3672 ATGTTGGGGAATACGAAGCATGATGTGTTCCTCAGCTTTAGAGGAGAAGACACGCGCAACAGCTTTACCAGTCATCTTTACGCAGCCTTATGCGCTAAAAGGATCAAGACTTACATGCATGACACGCGCGGTGATGATGACGGAGGAGAAGAGAAAGAAGCAATACAACAATCAAATATCTATGTCATCATTTTCTCTCAACACTATGCCCATTCGGTGCGGTGTTTGGACCAACTCACAAAGATTCTGGAATGCAAGGAGAGATATGGAAGGGATGTCATACCTGTTTTCTATAAGATGGATCCATCAAATGTTGCCAATCAAACAGGCAGTTATGCTGATGCGTTTGTTAAGCATCAACAACGATTTGGAGACAAAGTGCAGAGGTGGAAGCTTGCTCTAACTCAAGTTGCTGGATTATCTCCCCCTCGTTCAAAAATATACAGTCCTGATTACATACTTGTTGAAGAAATTGTTCAACACATTTGGAGAAGATTGAAAAGCAATTACTCAACTGATTACCAAGGACTGGTTGGAATTCACAACCATATTGCACAAATCCACTCCTTGTTGCATGTTGAGTTAGAAGCCGTTCGGATCATAGGAATATGCGGCATTGGAGGAATAGGTAAGACAACAATTGCTGGTGCATTGTATCATGAATTGTCATCCCAATTCAGTTTCAGCACTTTTGCTGTAAATGTTCAACAACAAATAGAAAACCATGGGATGCAGCACACACAAAGCAAATATATATCAGAGCTTCTAGAAGAAAAAATGCCTGCAGATTCTTTGGGATTGAGAGTGTTAACAGAAAAGCTTAAAGTGTCCAAGGTTCTCCTCATTCTTGATGATATGAACAATTCAGCTCAAATAAGAGATTTCATTGGAGGACATGGTATCTTTGGCCTGGGAAGTAGGATCCTTGTGACAAGTAGGAGCTTGCAAACGCTTAAGGATGCTGGAGTTGATGAGATGTATGAGATTAAGGAGATGAACTTTCAAGATTCCCTACAACTATTCTGTTTAAATGCCTTCAAGCAAAAAAATCCAACAGAAAATTATATGAGCTTATCAAGAATGATGTTAAGTTACGCAAAAGGGATTCCTTTGGCTCTCAAAGTTTTAGGATCAATGCTTCATGGTAGCAGAGAGGAAGAATGGGAACGTGTATTGCAAAAGCTTGAAAAGATTCCCAATCTTAAAACTTATGACTTGTTGAAACTGAGTTATGATGGGCTTAGTGAAGAACAGAAGGATATGTTTCTTGACATAGCTTGCTTCTATAGAGAGGGACATGATGTGAATACTGTAAAACAAGCATTCGATAGCTGCGGTTTCAATGCTGCCACTGGAATCAGAGTTCTCAATGATAGAGGCCTCATATCTATGTTGAGAGGTGAACTGATGATACATGATCTAATACGGGAAATGGGTCAGGAAATAGTTCATCAACAGTGTGCTAATGAACCTGGAAAACGAAGTCGATTATGGAAGCATGAAGACATTTACCATGTTATAAGAGAAAACAAGGGGACGGATGCTATCCGGTGTGTATTTCTTGACATGTGCAAAATCAAAGAAGTTCAACTACATCCTGAAACTTTCAAAATGATGCATAATCTGAGACTGCTCCAGTTCTATAAGTCTAGCTCAACTCAAGCCTTAAAAGTGCGCCTTCCTGCATTTCTTCATAGTCTCCCAGATAGTTTATGGATTCTGTGTTGGAATGGCTTCCCTCAAAGATCTTTGCCACAGCACTTCTGCCCCAAAAATCTTGTTACACTCGACATGTGTGATAGTCAACTTGAACAACTTTGGGAAAAGGATCAGAAGTTACCAAATTTGAAAAGACTTGACCTCAGTGGTTCCAAGAACCTTGTTCAACTACCAGACCTTTCCCACTGCCCAAATATTGAAGAAATATTTCTCAGCCACTGCAAAAGCTTGGTTCGAGTTTACTCCTCAAGTTTCCTTAGCAAGCTCAACTGCGTATGGCTAAACGGCTGCACTGAGCTTAGAAATCTAAATCTTCCAAGCAACATTCTGTCAAAATCTTCAGGCTTAATAGTTCTCAATGACTGTAGCAACCTTGAGTTGTTTTCAATAAGCATCACCACAAAGGATGTTGTGTTACATGGTTGTTCCCGCAGTAGATCAATAGAGAGTCTCTTCAGAAACTGTTTGCCAGGGTCTATGATTCGGTGTATGATGGGAACAAGAGGAGGGTCCTTATTTGAGAGCTTTTCTGACACTTTTGACCCCAATGGGGGTGCTGCTGCTAATTTAGATGATGAACCAATGGATAATATACACTTACTAAACTTGAAAGTGTTAAGGGAAGGTTCACCTTCATCATTATTTCCAAGTCTCTCAGAGCTTTGTTGGTTAGATCTCTCTTACTGTGAATCCCTCACATCCCTTCCAATTAACCTTTTTAAGCTGAAATGGCTAAGAAAACTATATCTTCGTGGCTGCTCAAATCTCGAGAAGCTCCCTGAGATAGAAGAGGATATGGAAAATTTAATGGTGCTCATATTAGATGAATCAGGAATACAAGAATTACCTTCAACAATGCAAAATTTGGTAGGTCTTGAGGAGTTGAGCTTGCATGGTTGCAGAAGCCTTGTGTTCATTCCATCTTCAATTGGACGTCTCAGCAAACTCTGCATTCTTGATCTTACCTACTGTGAAGCACTTGAATCCCTTCCTAGCAGCATTTTCAACCTGAAGTTGACAAAGCTTGATTTGCATGGTTGCTCAATGCTGAAGAATTTACCAGAGATCACGGAACCTGCAGAGTCTTTTGCTCACATGAACCTGGCAAAAACAGCAATTAAAGAAATACCCTCATCCTTGGCCTATTTGGTTGGGCTTCAAACCTTGCAGCTCAACTTGTGCAAAGATCTTGAGTTTCTTCCAAACAGCATTGGTAATCTAAACCTTCTCTCCAAGCTTGATTTTTCAGGCTGTGAGAAACTCTCAGAACTTCCTAGTGACATTGGAAACTTGTCATCATTAAGGGAATTGTCGCTGCACGAAAGCAGCATAGTGGACCTTCCTGAGAGTATTGCTCATCTTTCAAGCTTGAAATCACTGGATTTAAGTGATTGCAAGAAGCTTGAAAATATCCCCGGCCTTCCACCATTTTTAGAACACTTTGTGGCGTTTGATTGCCCATCTGTTAGGAGAGTGTCAAGTTCAGGATTTGACATTAAACTTCCATCAGATTCCAAAGATGGTATTTTCAAGTTTCACCTTACCAATAGCCAAGAACTGACTCAAAGTTCTCAGAGTAATATTGCTGGTGATGCATGGCAAAGAATGCTAGATACTGCATATAGGTCTGTGTTGTTTTGCTTTCCAGGGAGTGCAGTTCCTCATTGGTTCCCTAATCGTTGCAAAGGACATTCAGTAACATTGAAGCAGAGTTCTCTAAATTGGTGCAGTGATAACAGGTTCATTGGTTTTGCTTTATGTGTGGTTTTTGGACTTGAAGGCATGCATGATGAAGAATGTAAATATAGTGTTTTTAGCTATAGATTCACATATGAATGTGATGATGGCATTCATGTTGTTCCCAGCAATGATCAGCTAAGATACTATTTCAATTGGAAGGGCAGACAGAGATTCATTCTTCATGATCACACATTCATTTGGAAATCTTACTTGGAGACTCAGACCATCAACCACATGCTGTCTCATAATGCACACAACTTCAGTTTCCAGATATGCAAGTATGATGTTGGTCGCTCTTGGCCAAATTATAGGCCAAGGTTCAATATAAAGGAGTGTGGAATATCTCCCCTTTATACCAACTGA 3822 0.4014 MLGNTKHDVFLSFRGEDTRNSFTSHLYAALCAKRIKTYMHDTRGDDDGGEEKEAIQQSNIYVIIFSQHYAHSVRCLDQLTKILECKERYGRDVIPVFYKMDPSNVANQTGSYADAFVKHQQRFGDKVQRWKLALTQVAGLSPPRSKIYSPDYILVEEIVQHIWRRLKSNYSTDYQGLVGIHNHIAQIHSLLHVELEAVRIIGICGIGGIGKTTIAGALYHELSSQFSFSTFAVNVQQQIENHGMQHTQSKYISELLEEKMPADSLGLRVLTEKLKVSKVLLILDDMNNSAQIRDFIGGHGIFGLGSRILVTSRSLQTLKDAGVDEMYEIKEMNFQDSLQLFCLNAFKQKNPTENYMSLSRMMLSYAKGIPLALKVLGSMLHGSREEEWERVLQKLEKIPNLKTYDLLKLSYDGLSEEQKDMFLDIACFYREGHDVNTVKQAFDSCGFNAATGIRVLNDRGLISMLRGELMIHDLIREMGQEIVHQQCANEPGKRSRLWKHEDIYHVIRENKGTDAIRCVFLDMCKIKEVQLHPETFKMMHNLRLLQFYKSSSTQALKVRLPAFLHSLPDSLWILCWNGFPQRSLPQHFCPKNLVTLDMCDSQLEQLWEKDQKLPNLKRLDLSGSKNLVQLPDLSHCPNIEEIFLSHCKSLVRVYSSSFLSKLNCVWLNGCTELRNLNLPSNILSKSSGLIVLNDCSNLELFSISITTKDVVLHGCSRSRSIESLFRNCLPGSMIRCMMGTRGGSLFESFSDTFDPNGGAAANLDDEPMDNIHLLNLKVLREGSPSSLFPSLSELCWLDLSYCESLTSLPINLFKLKWLRKLYLRGCSNLEKLPEIEEDMENLMVLILDESGIQELPSTMQNLVGLEELSLHGCRSLVFIPSSIGRLSKLCILDLTYCEALESLPSSIFNLKLTKLDLHGCSMLKNLPEITEPAESFAHMNLAKTAIKEIPSSLAYLVGLQTLQLNLCKDLEFLPNSIGNLNLLSKLDFSGCEKLSELPSDIGNLSSLRELSLHESSIVDLPESIAHLSSLKSLDLSDCKKLENIPGLPPFLEHFVAFDCPSVRRVSSSGFDIKLPSDSKDGIFKFHLTNSQELTQSSQSNIAGDAWQRMLDTAYRSVLFCFPGSAVPHWFPNRCKGHSVTLKQSSLNWCSDNRFIGFALCVVFGLEGMHDEECKYSVFSYRFTYECDDGIHVVPSNDQLRYYFNWKGRQRFILHDHTFIWKSYLETQTINHMLSHNAHNFSFQICKYDVGRSWPNYRPRFNIKECGISPLYTN* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3672 1273 ProSiteProfiles TIR domain profile. 5 166 IPR000157 GO:0007165
Ahy3g3672 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 425 IPR027417 -
Ahy3g3672 1273 SUPERFAMILY RNI-like 571 847 - -
Ahy3g3672 1273 SMART LRR_typ_2 1004 1027 IPR003591 -
Ahy3g3672 1273 SMART LRR_typ_2 886 910 IPR003591 -
Ahy3g3672 1273 SMART LRR_typ_2 613 636 IPR003591 -
Ahy3g3672 1273 SMART LRR_typ_2 839 861 IPR003591 -
Ahy3g3672 1273 SMART LRR_typ_2 791 815 IPR003591 -
Ahy3g3672 1273 Pfam TIR domain 6 180 IPR000157 GO:0007165
Ahy3g3672 1273 Pfam C-JID domain 1121 1272 IPR045344 -
Ahy3g3672 1273 Gene3D - 169 326 IPR027417 -
Ahy3g3672 1273 SMART till_3 6 140 IPR000157 GO:0007165
Ahy3g3672 1273 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 140 IPR035897 -
Ahy3g3672 1273 Pfam NB-ARC domain 186 397 IPR002182 GO:0043531
Ahy3g3672 1273 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 865 1195 - -
Ahy3g3672 1273 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 703 - -
Ahy3g3672 1273 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 865 1195 IPR044974 GO:0006952
Ahy3g3672 1273 SUPERFAMILY "Winged helix" DNA-binding domain 403 507 IPR036390 -
Ahy3g3672 1273 Gene3D Ribonuclease Inhibitor 484 735 IPR032675 -
Ahy3g3672 1273 Gene3D Ribonuclease Inhibitor 768 934 IPR032675 -
Ahy3g3672 1273 SUPERFAMILY L domain-like 774 1058 - -
Ahy3g3672 1273 Gene3D Ribonuclease Inhibitor 935 1116 IPR032675 -
Ahy3g3672 1273 Gene3D - 332 415 IPR042197 -
Ahy3g3672 1273 Gene3D - 3 168 IPR035897 -
Ahy3g3672 1273 PRINTS Disease resistance protein signature 366 380 - -
Ahy3g3672 1273 PRINTS Disease resistance protein signature 200 215 - -
Ahy3g3672 1273 PRINTS Disease resistance protein signature 611 627 - -
Ahy3g3672 1273 PRINTS Disease resistance protein signature 273 287 - -
Ahy3g3672 1273 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 703 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3672 Ahy-Chr3 136048567 136053648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3672 790 962 WRKY Transcription Factor Family AT4G12020 39.080 6.67e-15 78.6