Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3665 ATGGCCGCCAACAACAATCCGCATTCTCTCACTGATCAGAATGCGAATTCTATGCTTCCGCCTATTCTTGATCATCAATTCTCCACTACCCCTGCTCTTAGGCTTCTGGTCGTTGATCATGATCCTGAACACTTAAGACTTATTCAAGATATCGCTTTTCAATGCAACTATCAAGTGACCACATGCTTCGAGGGTTCTCATGCTTTGAATCTTCTTCGGGAGAGCAGTGGGTGCTTCGATGTGGTACTATGTGATGTTCATATGCCAGGGATAATGGATGATGGTTCTCGGTTACTTGACCATGTTCTCCAAGAATTCAATATTCCTGTCGTAATGATGTGTGCAACAGATGATGAGTCATCAAGTGCAGTGATGGAGGGTATGAAAAAGAAAGGGGCTTGTTATAATTTAGTTAAACCTCTTAGCGAGCAAGATTTGAGGAACATGTGGCAGAATGTGGTGGAGAAAACCCAGAAAGAAGTTTGCTATGATGATGATGAAAGCAAAGGAACAGTTAATAGAAGGAAGAGGAGCTTATCAACGGAAAGAGACGATCATGATCATGATGTTCAGTCCAACACTCCTAACAAGAAGCCACGTTTTATTTGGACCCCAGAAAGGCATCAAATGTTCGTCGATGCTGTACTCCAACTAGGGATTGATAAAGCTGTGCCAAAGAAAATTCTAGAATTGATGGATATCCCTGACTTGACACGGGAAAATGTAGCAAGCCATCTCCAGAAATATCGGATGCATCTTAAGCAGAAGAGTGAGGAGACTATGCAAACAAATATTATTGGGAAGCTAAATGTTAATAGAGAAGCTAATAAGCAACTTTGTGCACCATTGAGGGTTCAAGCTACAACCAACGTTCCTCAAATTCCACAAACACTGCCTCTTCATCACCAATATTATTCTTCATTATCTGTGCCAACTGTTAGTGCTGCACCTCATGCTTTGAAATTCCCTAATAGTAACTCCTTTGGTCTCATCAACAACAATGGCATTGTTGGAAGTAACATGGCACTTAATCATCAGAATAATGACTATGGTCGTTATATTACTATGAACCTGAACCTAATGCAACAGCAACAGCACCAACAGCTACAGTCACCGGTGCAAAATCACTACCATCATCGTAATCAAAGTCATTATTATCCAATGATGGCTCCTCAATCCGGTGATGGAGCTGCTTTTCAAGGGGTAACGAGGGGAGTCAGCGGAAGTGGCAGCATTGCTGAGATTCTGAATGATGGCTATATATCATCATCAGCACCACCCTCATCATCATCGTCCCTTTCTCCAACAGGATTCTTCTCAAGAACTCACCACCAGCACAATCATCAGCAGCTTCCAGCCGGGGACCTTGACGACAATTTTTGGGACGGCCTATATACTCTTTGA 1404 0.4245 MAANNNPHSLTDQNANSMLPPILDHQFSTTPALRLLVVDHDPEHLRLIQDIAFQCNYQVTTCFEGSHALNLLRESSGCFDVVLCDVHMPGIMDDGSRLLDHVLQEFNIPVVMMCATDDESSSAVMEGMKKKGACYNLVKPLSEQDLRNMWQNVVEKTQKEVCYDDDESKGTVNRRKRSLSTERDDHDHDVQSNTPNKKPRFIWTPERHQMFVDAVLQLGIDKAVPKKILELMDIPDLTRENVASHLQKYRMHLKQKSEETMQTNIIGKLNVNREANKQLCAPLRVQATTNVPQIPQTLPLHHQYYSSLSVPTVSAAPHALKFPNSNSFGLINNNGIVGSNMALNHQNNDYGRYITMNLNLMQQQQHQQLQSPVQNHYHHRNQSHYYPMMAPQSGDGAAFQGVTRGVSGSGSIAEILNDGYISSSAPPSSSSSLSPTGFFSRTHHQHNHQQLPAGDLDDNFWDGLYTL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3665 467 SUPERFAMILY Homeodomain-like 196 254 IPR009057 -
Ahy3g3665 467 Gene3D - 32 169 - -
Ahy3g3665 467 MobiDBLite consensus disorder prediction 164 200 - -
Ahy3g3665 467 SMART REC_2 33 150 IPR001789 GO:0000160
Ahy3g3665 467 MobiDBLite consensus disorder prediction 423 455 - -
Ahy3g3665 467 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 384 IPR045279 GO:0009736
Ahy3g3665 467 SUPERFAMILY CheY-like 33 157 IPR011006 -
Ahy3g3665 467 Pfam Response regulator receiver domain 36 149 IPR001789 GO:0000160
Ahy3g3665 467 Gene3D - 194 256 - -
Ahy3g3665 467 ProSiteProfiles Response regulatory domain profile. 34 154 IPR001789 GO:0000160
Ahy3g3665 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 254 IPR017930 -
Ahy3g3665 467 MobiDBLite consensus disorder prediction 164 194 - -
Ahy3g3665 467 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 252 IPR006447 GO:0003677
Ahy3g3665 467 MobiDBLite consensus disorder prediction 423 449 - -
Ahy3g3665 467 CDD REC_typeB_ARR-like 36 154 - -
Ahy3g3665 467 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 30 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3665 Ahy-Chr3 135986534 135988422 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3665 32 262 Response Regulator Gene Family AT4G31920 42.017 3.23e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy3g3665 Response_reg 8.30E-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3665 - K14491 adu:107481405 893.264