Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3663 ATGGCCGCCAACAACAATCCGCATTCTCTCACTGATCAGAATGCAAATTCTATGCCTCTGCTTATTCTTGATCATCAATTCTCTACTACCACTGCTCTTAGGCTTCTGGTCGTTGATCATGATCTTGAACACTTAAGACTTATTCAAGATATGGCTTTTCAATGCAACTATCAAGTGGCCACATGCTTCGAGGGTTCTTATGCTTTGAATCTTCTTCGGGAGAGTAGTGGGTGTTTCGATGTGGTACTATGTGATTTTCATATGCCAGGGATAATGGATGATGGTTCTCGGTTACTTGACCATGTTCTCCAAGAATTCAACATTCCTGTCGTAATGATGTGTGCAACAGATGATGAGTCATCAAGTGCAGTGATGGAGGGTATGAAAAAGAAAGGGGCTTGTTATAATTTAGTTAAACCTCTTAGCGAGCAAGATTTGAGGAACATATGGCAGAATGTGGTGGAGAAAACCCAGAAAGAAGTTTGCTATGATGATGATGAAAGCAAAGAAACAGTGAATAGAAGGAAGAGGAGCTTATCAACTGAAAGCGATGGTCATAATCAAGATGTTCAGCCCAACACTCCCAGCAAGAAGCCACGTTTTGTTTGGACCGAAGAAAGGCATCAAATGTTCGTCGATGCTGTACTCCAACTAGGGATTGATAAAGCTGTGCCAAGGAAAATTCTAGAATGGATGGATATCCCTGATTTGAGAAGGGAAAATGTAGCAAGCCATCTCCAGAAATATCGGATGCATCTTAAGAAGAAAATTGAGGAGACTAAACAAACAAATAGTGATGGGAAGATAAATGTTAATAGAGAAACTAACAAGCAACTTTGTGCACCATTGAGGGTTCAAGCTTCCACCAACATTCCTCAAATTACACAAACACTTTCCCTTCATCACCAATATTATTCTTCGTTATCTGTGCCAAAACATTATCCCGTTATTATGGCATCAAAGTGTGATCATCGTTTCCATCATCGGCCTCAACTCATTGTTAGTGCTGTACCTCATGCTTTGATGAAATCCCCTACTAGTGATAGTAATCCCTTTGACATCAACAACGACATTGTTGGAAGTAATATGACACTTAATCATCAGAATAATAATGATTATGGTCGTTACATTATTCAACAATCTAATTATAATTATCCGATGATGGCTCCTCAATCCTGGGATGGAGCTGCTTTTCAAGGGGGAATGAGGAGAGATAGTGGTGGCTGTAAGAGTGATCCTCTCGGTTGA 1248 0.4014 MAANNNPHSLTDQNANSMPLLILDHQFSTTTALRLLVVDHDLEHLRLIQDMAFQCNYQVATCFEGSYALNLLRESSGCFDVVLCDFHMPGIMDDGSRLLDHVLQEFNIPVVMMCATDDESSSAVMEGMKKKGACYNLVKPLSEQDLRNIWQNVVEKTQKEVCYDDDESKETVNRRKRSLSTESDGHNQDVQPNTPSKKPRFVWTEERHQMFVDAVLQLGIDKAVPRKILEWMDIPDLRRENVASHLQKYRMHLKKKIEETKQTNSDGKINVNRETNKQLCAPLRVQASTNIPQITQTLSLHHQYYSSLSVPKHYPVIMASKCDHRFHHRPQLIVSAVPHALMKSPTSDSNPFDINNDIVGSNMTLNHQNNNDYGRYIIQQSNYNYPMMAPQSWDGAAFQGGMRRDSGGCKSDPLG* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3663 415 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 252 IPR006447 GO:0003677
Ahy3g3663 415 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 30 304 - -
Ahy3g3663 415 MobiDBLite consensus disorder prediction 164 183 - -
Ahy3g3663 415 MobiDBLite consensus disorder prediction 164 198 - -
Ahy3g3663 415 Gene3D - 24 165 - -
Ahy3g3663 415 MobiDBLite consensus disorder prediction 184 198 - -
Ahy3g3663 415 SUPERFAMILY CheY-like 33 158 IPR011006 -
Ahy3g3663 415 SMART REC_2 33 150 IPR001789 GO:0000160
Ahy3g3663 415 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 304 IPR045279 GO:0009736
Ahy3g3663 415 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
Ahy3g3663 415 CDD REC_typeB_ARR-like 36 154 - -
Ahy3g3663 415 Pfam Response regulator receiver domain 36 149 IPR001789 GO:0000160
Ahy3g3663 415 ProSiteProfiles Response regulatory domain profile. 34 154 IPR001789 GO:0000160
Ahy3g3663 415 Gene3D - 194 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3663 Ahy-Chr3 135959315 135960941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3663 31 264 Response Regulator Gene Family AT5G58080 41.434 1.08e-44 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy3g3663 Response_reg 5.40E-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3663 - K14491 adu:107481405 631.713