Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3646 ATGGCTCATCAGCACCATGTTGTGTTGCTGGCGGGGATGATGATCATGCTCTCCGCCATGGCTGACACCGACTCATTCATATTCGGAGGATGCTCTCAGGTGAAGTTCATGCCGGGTTCACCCTACGAGAACACCGTAAACTCCCTCTTAACCTCACTCATAAACTCAGCCACCTTCACCAACTACAACAACTTCACCATTCAGCCAACTCCCTCTTCCTCCGCCACCGTCTACGGCCTCTACCAGTGCCGCGGCGACCTCTCCAACGACCGCTGCTCCCGCTGCGTGGAGCGTGCCGTCAATCAGCTGGGCACGCTCTGCCTAGACGCATGCGGCGGCGCGTTGCAGCTGGACGGATGCTTTGTGAAGTACGATAATGTGAGCTTCTTGGGAGTGGAAGACAAGACTGCGGTGATGAAGAAATGTGGACCGTCCATTGGGTTGACCTCCGATGCGATGACCAGGCGGGATGAGGTGCTGGCGTATTTGGAGACGTCAGATGGGAGCACCTATAAGACGTACAGGACGAGTGGGTCGGGGAATGCGCGGGGTGTGGCGCAGTGCACGGGAGACCTCAGCCCAACGGAGTGTCAGGATTGCCTCTCTGATGCAATCCAACGGTTGAAAATGGAGTGCGGAGCATCCACGTGGGGTGACATGTATCTCGCCAAGTGCTACGCGCGATACTCGGAAGGTGGCAGGTACTCGCGCAACAGTAACGATGATAGCAATCACAATGATGATGAAATTGAGAAGACACTAGCCATCCTAATTGGTCTCATAGCTGGTGTTGCTCTAATAATCGTTTTCCTTTCCTTCTTGTCCAAGGTCTGCGAAAAGCACAAAGGTGGTAAATAA 858 0.542 MAHQHHVVLLAGMMIMLSAMADTDSFIFGGCSQVKFMPGSPYENTVNSLLTSLINSATFTNYNNFTIQPTPSSSATVYGLYQCRGDLSNDRCSRCVERAVNQLGTLCLDACGGALQLDGCFVKYDNVSFLGVEDKTAVMKKCGPSIGLTSDAMTRRDEVLAYLETSDGSTYKTYRTSGSGNARGVAQCTGDLSPTECQDCLSDAIQRLKMECGASTWGDMYLAKCYARYSEGGRYSRNSNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3646 285 Gene3D - 148 232 IPR038408 -
Ahy3g3646 285 Gene3D - 23 129 IPR038408 -
Ahy3g3646 285 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Ahy3g3646 285 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 282 - -
Ahy3g3646 285 Pfam Salt stress response/antifungal 157 230 IPR002902 -
Ahy3g3646 285 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Ahy3g3646 285 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 8 282 - -
Ahy3g3646 285 ProSiteProfiles Gnk2-homologous domain profile. 134 234 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3646 Ahy-Chr3 135808840 135810694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3646 6 229 Pollen Coat Proteome AT4G20670 23.967 1.54e-14 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3918 13 138609904 138612098 Ahy3g3646 3 135808840 135810694 hybridization