Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3621 ATGATGATGGAGGAGAGGAAGAAGTTTGTGTGCAAGTATTGCAGCAAGAGGTTTCCATGTGGCAAGTCTCTTGGTGGTCACATCAGGACCCACATCACTGAAGAAAGAACCACCATCAATGCTTCTTCTTCTCCCATTGCTGCTAACACTCATGATCTTCTTCTCAAGAAGAGGAAGAGGGATTCATCATGGCCTACTCAATCTGCTGCTGTTGGTGGTGGTGCTGCTGCTGGTAACAATAATAATAGCCCCATTTATGGGCTAAGGGAGAATCCCAAGAAGACAACAAGGTTTGTGCATATTGATGGTGCTGCTGCCACCAACTTGGCACGTGAGAAGGAAGAAAGGTTCTGCAAGGAATGTGGGAAAGGCTTTCCATCAATGAAAGCTCTGTGTGGCCACATGGCTTGTCACTCTGACAAAGACAAAGACAGAGAGAAATTGGTGGTTATGGCTATGGATGATGATGGTGATGATGATGAATATGGTGATAATAATAGCCAATCTGATGCTGAGAGTTCTGGTGGTGCTGCTGCTTCGTTGCTTCCAAGGAGGAGATCCAAGAGGATGATGAGGTTCAAGAATCTCAGACCCTTTTGTTCTTCTTCTCCATCTGCTTCTGTCTCTGAAGTGGAGCAGCAGCAGGAGGAGCAAGAAGAGGTTGCTAGGATGCTCATGATGCTCTCAAGAGATTCCGGCCGGAGGGGTCGATTCGTGTCTCTTACTGAGTCTTCTGATAACAATTCTGTTGTTCTTAACACCAATAAGGTTGCTGCTGTGACTGTGAGTAATAACAATGGCAGGAAGAACTTTGTGCCTAATGATTCAGATTCAGCTGCTGGGTCTCTGAGGAGTGGCCTCAAGAACAAAATGGTTGATTCAGATGTCTCAATGGATGAATTCAAAGGGTGGAAGAATGTTAAAGATAAAGACAAAGAGAGAAGAAGCAAATACAGTAGTACTGTTGCTTTTGCTGCTGCAGTTAAGGATTTGGAATATGAAACAACAATATCTACTACTGCTACTACAAGGAAGAAGTTTGATTTCAGAAAGAGAGCAAATTATGATTCTCTTATTCACAGTTCAACTGAGGTTCCTACCAAGAATGAAAAAACTGGTTTCGCCAATGATGAATATGATGATTGTTCTTATGATTCAACAGAATATGATGATGTTGATGAAGATGAAGAGAGTGATGAGAACAGCACTGATACTGATACTGATTCATTTCCTGCTCCAAAGGCTCATAGCACTAAGGCCAGTACAAAGGCTAATAAGAAAAAGAAGAACATGAAGAAGAAGAAGTTGAAGTCAAAGAAAAGCAAGGAACATGAATGTCCAATTTGCTACAAGATTTTCAAGTCAGGACAAGCGTTAGGAGGACACAAAAGATCCCATTTCATTGGAGGTTCATCAGAGGAGAACACTTTGGTCATCAAGCAGCATCATGCTGCTCCTTCTTCTCTTGTTGTTGTTCCTAATTGCCTAATTGATCTCAATCTTCCTGCTCCTGTTGATGACTAA 1524 0.4232 MMMEERKKFVCKYCSKRFPCGKSLGGHIRTHITEERTTINASSSPIAANTHDLLLKKRKRDSSWPTQSAAVGGGAAAGNNNNSPIYGLRENPKKTTRFVHIDGAAATNLAREKEERFCKECGKGFPSMKALCGHMACHSDKDKDREKLVVMAMDDDGDDDEYGDNNSQSDAESSGGAAASLLPRRRSKRMMRFKNLRPFCSSSPSASVSEVEQQQEEQEEVARMLMMLSRDSGRRGRFVSLTESSDNNSVVLNTNKVAAVTVSNNNGRKNFVPNDSDSAAGSLRSGLKNKMVDSDVSMDEFKGWKNVKDKDKERRSKYSSTVAFAAAVKDLEYETTISTTATTRKKFDFRKRANYDSLIHSSTEVPTKNEKTGFANDEYDDCSYDSTEYDDVDEDEESDENSTDTDTDSFPAPKAHSTKASTKANKKKKNMKKKKLKSKKSKEHECPICYKIFKSGQALGGHKRSHFIGGSSEENTLVIKQHHAAPSSLVVVPNCLIDLNLPAPVDD* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3621 507 MobiDBLite consensus disorder prediction 381 404 - -
Ahy3g3621 507 Gene3D Classic Zinc Finger 2 66 - -
Ahy3g3621 507 SUPERFAMILY beta-beta-alpha zinc fingers 7 138 IPR036236 -
Ahy3g3621 507 ProSitePatterns Zinc finger C2H2 type domain signature. 118 138 IPR013087 -
Ahy3g3621 507 MobiDBLite consensus disorder prediction 367 440 - -
Ahy3g3621 507 ProSitePatterns Zinc finger C2H2 type domain signature. 11 31 IPR013087 -
Ahy3g3621 507 MobiDBLite consensus disorder prediction 420 440 - -
Ahy3g3621 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 444 466 IPR013087 -
Ahy3g3621 507 MobiDBLite consensus disorder prediction 155 186 - -
Ahy3g3621 507 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 507 - -
Ahy3g3621 507 ProSitePatterns Zinc finger C2H2 type domain signature. 446 466 IPR013087 -
Ahy3g3621 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 116 143 IPR013087 -
Ahy3g3621 507 MobiDBLite consensus disorder prediction 405 419 - -
Ahy3g3621 507 Pfam C2H2-type zinc finger 118 140 - -
Ahy3g3621 507 Pfam C2H2-type zinc finger 444 466 - -
Ahy3g3621 507 Pfam C2H2-type zinc finger 9 31 - -
Ahy3g3621 507 SMART c2h2final6 444 466 IPR013087 -
Ahy3g3621 507 SMART c2h2final6 9 31 IPR013087 -
Ahy3g3621 507 SMART c2h2final6 116 138 IPR013087 -
Ahy3g3621 507 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 507 - -
Ahy3g3621 507 ProSiteProfiles Zinc finger C2H2 type domain profile. 9 36 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3621 Ahy-Chr3 135507698 135510407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3621 7 507 C2H2 Transcription Factor Family AT1G26610 37.613 8.52e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy3g3621 zf-C2H2_6 1.30E-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3621 - - aip:107634772 849.351