Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3618 ATGGAACCCTGCCAAAAGCCTCCGCCGCCACCAGAACAATCCGACGCCTCTTATTTTTTCTCCGCCGTCACCGACAGCACCAACATGCTCGCCGACTTTGACTGGATCGGAGGAGAAGAAGGCGACACCATCTGCCTGCCGCCGGAGAACAACAGCAACAACAATAATCAATCGCCGTCTTCAAGCTCAGCTGAGGATCCGCCGGAGAGTTCGATCGCCTCCGACGGGAAACAGCTCGACAAAGAGAAACCACCGAGTAGAAATAAGAAGAAGCAGAAACGAATGAAGCAGCCACGGTTTGCTTTTATGACTAAGAGTGAAACCGATCATCTTGAAGATGGCTACAGATGGCGAAAGTACGGCCAGAAGGCAGTTAAAAATAGTCCATTCCCCAGGAGCTACTATCGTTGCACAAACAACAACTGCAGTGTGAAGAAAAGGGTGGAACGCTCCTCGGAGGACCCAACTATTGTGATAACCACATATGAAGGCCAACACTGCCACCACTCCGTAGGGACATTCCACCACCACCGACAACTAAGTGGCATGCTTAGTAGTAATCAAAAATCCACATTTGCAACTCAATTTTCCCTTGGAAATATGTCACACTTCTATTATCCAATTGATCAATTACCTGAAGAAAACACACTTATTAGTAGTAGTGTTTCTGATGATCCTTATTGTCACTCACACAATAATGATAATTACAATGGAAGATGCAGCATTACATTGGCAGATTCATCAACCCCAGAAGAGCTACCCACAGATGATGGACTACTTGGAGATATTCTTCTGCCTAGGCAAATGCGTAACGGATGA 819 0.4652 MEPCQKPPPPPEQSDASYFFSAVTDSTNMLADFDWIGGEEGDTICLPPENNSNNNNQSPSSSSAEDPPESSIASDGKQLDKEKPPSRNKKKQKRMKQPRFAFMTKSETDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNNNCSVKKRVERSSEDPTIVITTYEGQHCHHSVGTFHHHRQLSGMLSSNQKSTFATQFSLGNMSHFYYPIDQLPEENTLISSSVSDDPYCHSHNNDNYNGRCSITLADSSTPEELPTDDGLLGDILLPRQMRNG* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3618 272 SUPERFAMILY WRKY DNA-binding domain 103 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g3618 272 MobiDBLite consensus disorder prediction 38 101 - -
Ahy3g3618 272 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 48 231 - -
Ahy3g3618 272 Pfam WRKY DNA -binding domain 112 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3618 272 MobiDBLite consensus disorder prediction 46 69 - -
Ahy3g3618 272 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3618 272 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 231 IPR044810 GO:0003700
Ahy3g3618 272 Gene3D WRKY domain 98 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g3618 272 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3618 Ahy-Chr3 135455291 135459275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3618 54 271 WRKY Transcription Factor Family AT1G69310 49.541 1.13e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy3g3618 WRKY 5.80E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3618 - - lang:109359112 221.861