Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3588 ATGGAAGGAAGTAGTAGAAGTTGTGAACTACTACCACCAGGGTTTAGATTCCACCCAACAGATGAGGAGCTAATTGTGTATTACCTTTGTAACCAAGCAACATCAAAGCCCTGCCCTGCTTCCATCATCCCTGAAGTTGACATCTACAAATTTGATCCATGGGAATTGCCAGGGAAAGCTGAGTTTGGGGAGAAAGAATGGTACTTCTTTAGCCCAAGGGACAGGAAGTATCCGAATGGGGTTCGGCCGAACCGTGCAACGGTTTCTAGGTATTGGAAGGCCACAGGGACAGACAAGGCTATTTACAGCAAGTGTAAGCATGTTGGTGTCAAGAAGGCCTTGGTTTTCTACAAGGGTAGACCTCCAAAGGGGATCAAGACTGATTGGATCATGCACGAATATCGTCTTCTTCAACAATCTAATCACAACAGCAGGACCACTGGTTCTATGAGACTGGATGACTGCGTCTTGTGTAGGATATATAAGAAAAAACATGCTGCTAAAGCATTGGATCAAGGACAGGAATACCCAACAACAGTTCAAATTAATCTAAATGCATCAACCAACAATGATGATCAGAAGGAGTTGATGATGATGAAGAATCTTCCAAGGACTTGTTCCCTTACTTATCTTTTGGACATGAATTACTTTGGTCCAATCTCACAGCTATTGTCTGATGGATCCTACAACAACTCATCAACCTTTGAAATATGTCAACATAGCAATAGTGTTGACAACATTGGAATAGTGGATCCTCTTGTCAAAACTCAAATGGTTGAAATGGATGATAGCTATTATGCTCAAGATTCAGGCAAGTCCCAAGTGATGAAACAAGGGAATGATTTAAGAGGATATTACTAA 861 0.4158 MEGSSRSCELLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPGKAEFGEKEWYFFSPRDRKYPNGVRPNRATVSRYWKATGTDKAIYSKCKHVGVKKALVFYKGRPPKGIKTDWIMHEYRLLQQSNHNSRTTGSMRLDDCVLCRIYKKKHAAKALDQGQEYPTTVQINLNASTNNDDQKELMMMKNLPRTCSLTYLLDMNYFGPISQLLSDGSYNNSSTFEICQHSNSVDNIGIVDPLVKTQMVEMDDSYYAQDSGKSQVMKQGNDLRGYY* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3588 286 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Ahy3g3588 286 PANTHER NAC TRANSCRIPTION FACTOR 56 9 261 - -
Ahy3g3588 286 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Ahy3g3588 286 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Ahy3g3588 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 9 261 - -
Ahy3g3588 286 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3588 Ahy-Chr3 135147802 135149043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3588 1 223 NAC Transcription Factor Family AT1G69490 65.368 1.81e-107 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g3588 NAM 8.50E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3588 - - adu:107489303 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3859 13 138011508 138012846 Ahy3g3588 3 135147802 135149043 hybridization