Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3583 ATGAACTCATGCCCATCTAGCTTTATATACTCTTCCTCATCACAGCAAAATACCAGTAATTCAATGGGGATGGTTTATGAAGACATGGCTTCTCTTTCTCTTTGCTCCAACTACACTCTCACCCCCTCCGCAGCCAGCTGGGGCTTCCCCTATGAGGAGCACCCCACTCACAACAGTGATCTTGCGGAGGGTACTACAAAAGGTTCTGATAGCAGCGAAGATAATGGGGTTATTGGAGAAAACAATAACAACAACAACAACCCTAATAATAAAGAGGGAGAGAGTAGTAGCGGACAGTCAAAGCTTTGTGCAAGAGGTCACTGGAGACCAGCAGAAGATTCAAAACTGAAGGAGCTTGTTGCTCTTTATGGCCCTCAGAACTGGAATCTCATAGCTGAAAAGCTAGAAGGAAGATCAGGGAAGAGTTGTAGACTGAGATGGTTCAACCAGCTTGACCCGAGAATAACGAGGAGAGCTTTCAGTGAAGAAGAGGAAGAGAGGCTGATGCAGGCTCATAGGATTTATGGCAACAAATGGGCCATGATTGCAAGGTTGTTCCCTGGAAGAACCGATAACGCTGTTAAGAATCATTGGCATGTTATTATGGCTAGAAAGTATAGGGAACAATCCAGTGCTTATAGGAGAAGAAGGCTCACACAATCAAACAACTTTTACAGAAGAATTGACCATAACAATAATAATAATAATAATAATGTATCATCAGAATCATCACCACCACCACACTGTTTTGTGGCTGGCTTCTCATCACTACCGTTTCATGGTGGTGTTCTTGACTTTGGTGCCAATAATAAGCCTTATGCTGCTGTTGCTTCCTCTTCTTCTTCCACCTTCAATTTCTTCTCTGGAGGTAGAGGCAATAATAATAGTAGTGAGATGGTAGGAGGAGAGTATTATTATGGAAGTAATCATCATCATCATTATAATCAGCAGCAAGCACATAATAATAATCATGCTTACTACACTCGTTATCCTAATCATCAGTATATGATGATGATGATGCCATCAGTGCAACAGCATCAAAACAACAACCATAACAAGAATTTTTACAGCTTCTCATCAAATTCAAGCACCACAGTAGCACAGGTGCTAGGCAGTGATCCTTCACTATCATCCATGGCAGAACAACAACACAGAGATCATGAAGAAGCCAGTGACCCCCCAACAACAATCCCAGAGCCTCCGTTATTTATTGACTTCCTTGGAGTAGGAGCCACAACATGA 1242 0.4227 MNSCPSSFIYSSSSQQNTSNSMGMVYEDMASLSLCSNYTLTPSAASWGFPYEEHPTHNSDLAEGTTKGSDSSEDNGVIGENNNNNNNPNNKEGESSSGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRITRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLTQSNNFYRRIDHNNNNNNNNVSSESSPPPHCFVAGFSSLPFHGGVLDFGANNKPYAAVASSSSSTFNFFSGGRGNNNSSEMVGGEYYYGSNHHHHYNQQQAHNNNHAYYTRYPNHQYMMMMMPSVQQHQNNNHNKNFYSFSSNSSTTVAQVLGSDPSLSSMAEQQHRDHEEASDPPTTIPEPPLFIDFLGVGATT* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3583 413 MobiDBLite consensus disorder prediction 61 102 - -
Ahy3g3583 413 SUPERFAMILY Homeodomain-like 105 198 IPR009057 -
Ahy3g3583 413 ProSiteProfiles Myb-like domain profile. 152 202 IPR001005 -
Ahy3g3583 413 ProSiteProfiles Myb-like domain profile. 105 151 IPR001005 -
Ahy3g3583 413 PANTHER MYB TRANSCRIPTION FACTOR 272 412 - -
Ahy3g3583 413 PANTHER MYB TRANSCRIPTION FACTOR 22 279 - -
Ahy3g3583 413 CDD SANT 108 149 IPR001005 -
Ahy3g3583 413 Pfam Myb-like DNA-binding domain 157 200 IPR001005 -
Ahy3g3583 413 Pfam Myb-like DNA-binding domain 105 151 IPR001005 -
Ahy3g3583 413 MobiDBLite consensus disorder prediction 374 401 - -
Ahy3g3583 413 PANTHER MYB PROTEIN-RELATED 272 412 - -
Ahy3g3583 413 SMART sant 156 204 IPR001005 -
Ahy3g3583 413 SMART sant 104 153 IPR001005 -
Ahy3g3583 413 MobiDBLite consensus disorder prediction 55 106 - -
Ahy3g3583 413 PANTHER MYB PROTEIN-RELATED 22 279 - -
Ahy3g3583 413 CDD SANT 159 199 IPR001005 -
Ahy3g3583 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 206 IPR017930 -
Ahy3g3583 413 Gene3D - 105 156 - -
Ahy3g3583 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 151 IPR017930 -
Ahy3g3583 413 Gene3D - 158 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3583 Ahy-Chr3 135067358 135069316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3583 104 217 MYB Transcription Factor Family AT1G69560 90.351 2.54e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g3583 Myb_DNA-binding 1.80E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3583 K09422 - gmx:100804537 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3853 13 137926349 137928410 Ahy3g3583 3 135067358 135069316 hybridization