Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3581 ATGGAAAATGTGCAAAGTAGCATGCACTTGATTCTCTCAACTGATGCAAAGCCAAGGCTCAAATGGACTCCTGAACTTCACCAAAGATTCATTGAGGCAATTAATCAGCTTGGAGGTTCAGAAAAAGCAACACCAAAGAGTCTTATGAGGGTGATGGGGATTCCTGGACTCACTTTGTACCATCTCAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACCACAACTTGAAATCTGTTCTGGCAACAACAAACATGAAGATTGCAGAGAAATGAAGAACAGTGAAGGTCCTTGTAGCAGCAGGGAAGAAAGTATTGGGACACAGAATGAGATGACTGAAAGCATGCAAATTGCTGAGGCTCTCCAAATGCAAATGGAAGTGCAGAAGAAACTTTATGAGCAAATTGAGAGACATTTGCAGCTTAAGATTGAAGCACAAGGGAAGTACTTGCAATCAGTACTACACAAGGCACAAGAAACACTTGCAGGAATGATCAACAATGGCAGCCCGGGATCTCCTCCGATTTCGGAACTGACAGAAACAAGAGGAGGGTTCAGTTGGAGCTGTGGGCAGAGGAAACAGAACAGAGGAACCATGTGTTCACTTGAAATTGAAAGTTCTTTGACATCTTCTGAAAGTTCAATGGATCAAAGGCCTAATAGTACTAACACTACTAATACTGCTTCACTTGAATTGTTGCCACTCTTTAAAGAATCTAAGGAACAGGAAGATGAATCTATTATTGGGAGAAAGAGGAGTTCAAGCTGCTGTGTTGATCAGCCATCAAAGATGAGCAGATCTGAATTAGTGTCAGATATCATTGACTTGAATTCAGAACAAATAGATTTAAATTGCAGTTCAAGCTTCTGGGAACAATGA 885 0.409 MENVQSSMHLILSTDAKPRLKWTPELHQRFIEAINQLGGSEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQPQLEICSGNNKHEDCREMKNSEGPCSSREESIGTQNEMTESMQIAEALQMQMEVQKKLYEQIERHLQLKIEAQGKYLQSVLHKAQETLAGMINNGSPGSPPISELTETRGGFSWSCGQRKQNRGTMCSLEIESSLTSSESSMDQRPNSTNTTNTASLELLPLFKESKEQEDESIIGRKRSSSCCVDQPSKMSRSELVSDIIDLNSEQIDLNCSSSFWEQ* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3581 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Ahy3g3581 294 MobiDBLite consensus disorder prediction 207 234 - -
Ahy3g3581 294 MobiDBLite consensus disorder prediction 207 266 - -
Ahy3g3581 294 MobiDBLite consensus disorder prediction 238 252 - -
Ahy3g3581 294 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Ahy3g3581 294 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 164 286 - -
Ahy3g3581 294 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
Ahy3g3581 294 Pfam Myb-like DNA-binding domain 19 70 IPR001005 -
Ahy3g3581 294 Pfam MYB-CC type transfactor, LHEQLE motif 117 162 IPR025756 -
Ahy3g3581 294 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 165 - -
Ahy3g3581 294 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 165 IPR044848 GO:0003700
Ahy3g3581 294 Gene3D - 16 74 - -
Ahy3g3581 294 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 164 286 IPR044848 GO:0003700
Ahy3g3581 294 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3581 Ahy-Chr3 135007378 135009211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3581 1 274 G2-like Transcription Factor Family AT1G69580 47.267 3.22e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy3g3581 Myb_DNA-binding 4.80E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3581 - - gmx:100805252 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3851 13 137875143 137876874 Ahy3g3581 3 135007378 135009211 hybridization