Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3571 ATGCATTCCTCTTTTCGTACCCTCTTTGTTGTAATGCTTTCTTTCTTTCCCTCTTTATCCATGGCCAAACATTATTATTACAACAATACTGTTCCACCAGCAACATTTTGTGACACCACAGAAGACCCTGCTTATTGCAAAACCCTGCTTGCAAACCAATACGGCACCGGTTATGACTACGGTCGAATTTGCGTCCAAAAATCAGTGTCACAATCACACAGCTTCTTGAATTTAATGGACTCATATCTCCAGGATGGATCATCGTACGATCAAAACACGATTCGAGCCCTGGAAGATTGTAGATTCCTCGCTGAACTAAACTTGGATTTCTTGTACAATACACAAGAGACGGTTAATAAATCCAGCAATGTTCTTCAATCTTCACATGCTGAAGACATTGTGACACAGCTCAGTGCTACTTTGACGAACCAACAAACATGTTTGGATGGTCTTCAAACCACAGCTTCCGATGAAAGAGTGAAGAGTTATCTTTCTTCAATGCTCTCTAATGATACCAAGCTCCATAGCATGTCCTTGTGTTTGTTCAGGAGGGGTTGGGCTCCTGAGAAGAAAATCAAACATTCATGGAAACAAAATGGTCGTTTACCGTATAAGATGCCGAAACGAGTACGTGACATGTATGATTCGGGTAGAGGCCGCCATGGAAACCACGGCCGCCACCACCACCTGAGGAAACTGCTTCAGACGGAAAGCGTAAATGTAAGGGATATGGTGGTTGTTAGCAAGGACGGAAGCGGAAACTTCACCACCATCAACGCAGCCATATCTGCGGCGCCAAATAACACGGCTTCCAGTGATGGCTACTTCCTTGTTTTCATCAAGAAAGGTGTGTATGAAGAGTATGTGTCCATTGCGAAGAACAAGAAACACTTGATGCTAGTTGGAGATGGAATCAACCAGACAATAATCACCGGCGATCGCAATGTTGTCGATGGCTCTACAACGTTCAACTCAGCAACTTTTGCTGTGGTGGGACAAGGTTTTGTAGCAGTGAACATAACATTTCGAAACACAGCAGGGCCAAGCAAGCACCAAGCAGTTGCCCTGAGAAGTGGAGCCGACTTATCAGCCTTCTACATGTGCAGCTTTGAGGGCTATCAAGACACACTCTACACCCATTCCATGCGTCAATTCTACAGCGATTGCCACATTTATGGTACCGTTGATTTTATTTTCGGTAACGCCGCGGTAGTCTTCCAAAATTGCAACATTTTCCCCCGCCTCCCTATGACCGGCCAGTTCAACTCAATTACCGCACAAGGAAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAACGATTCGAGCTGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGTAGGCCGTGGAAGCAATACTCGAGGACAGTTTTCATGGAATCTTTTATGGATGGTTTTGTTGATCCTGCTGGGTGGCATGATTGGAGTGGAAGTTTTGCGCTGAATACTTTGTATTACGCGGAGCATAAGAATGCGGGAAGTGGTTCAAGCACTGCAAGTCGAGTTTCGTGGCCTGGTTATCATGTTATTGGGGCAATGGATGCGGCTAATTTCACTGTGTCTAATTTCTTGCAGGGGGATAGCTGGTTGCCTCAAACGGGTGTTCCATTCTTGAATGGGTTAATATAA 1677 0.4532 MHSSFRTLFVVMLSFFPSLSMAKHYYYNNTVPPATFCDTTEDPAYCKTLLANQYGTGYDYGRICVQKSVSQSHSFLNLMDSYLQDGSSYDQNTIRALEDCRFLAELNLDFLYNTQETVNKSSNVLQSSHAEDIVTQLSATLTNQQTCLDGLQTTASDERVKSYLSSMLSNDTKLHSMSLCLFRRGWAPEKKIKHSWKQNGRLPYKMPKRVRDMYDSGRGRHGNHGRHHHLRKLLQTESVNVRDMVVVSKDGSGNFTTINAAISAAPNNTASSDGYFLVFIKKGVYEEYVSIAKNKKHLMLVGDGINQTIITGDRNVVDGSTTFNSATFAVVGQGFVAVNITFRNTAGPSKHQAVALRSGADLSAFYMCSFEGYQDTLYTHSMRQFYSDCHIYGTVDFIFGNAAVVFQNCNIFPRLPMTGQFNSITAQGRTDPNQNTGISIHNATIRAADDLAPRVGVVKTYLGRPWKQYSRTVFMESFMDGFVDPAGWHDWSGSFALNTLYYAEHKNAGSGSSTASRVSWPGYHVIGAMDAANFTVSNFLQGDSWLPQTGVPFLNGLI* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3571 558 Gene3D - 242 558 IPR012334 -
Ahy3g3571 558 PANTHER PECTINESTERASE 25 555 - -
Ahy3g3571 558 SUPERFAMILY Pectin lyase-like 243 555 IPR011050 -
Ahy3g3571 558 Pfam Plant invertase/pectin methylesterase inhibitor 35 179 IPR006501 GO:0004857
Ahy3g3571 558 CDD PMEI-like_3 35 187 - -
Ahy3g3571 558 SMART complete 280 460 IPR006633 -
Ahy3g3571 558 SMART PMEI_2 28 181 IPR006501 GO:0004857
Ahy3g3571 558 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Ahy3g3571 558 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 183 IPR035513 -
Ahy3g3571 558 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 184 IPR035513 -
Ahy3g3571 558 Pfam Pectinesterase 245 543 IPR000070 GO:0030599|GO:0042545
Ahy3g3571 558 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 25 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3571 Ahy-Chr3 134846469 134849041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3571 8 558 Carbohydrate Esterase AT1G02810 53.806 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3571 K01051 - gmx:100813051 762.296