Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3539 ATGGGAAAATTGGAAGTATTATTGAGAAATGGTGCAAATGACGAAGATTCATCATCATCATCATCATCATTAGTGCAAAAGGAGTACTTGTTTGACATTATCCTTCAACAACAAAAGCACGAAGCTACCACCAAAGAAGGAATCAATAATAATGAAGATAGTGATGATGAAGAACTTGTGTCACTCTCTCTAGGAGTCTCATCATCAGAAAAACTACTCACCGAGATGTGGCCACCGAGTAAAGTTCTCAAGACAACAAAAAATAATGGCGAAGGAAATGAAGCATCTCATCATCATTACCATAATACTCGCCTCAAGAAGGCTAGGGTTTCTATAAGAGCCAGATGTGATACACAAACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCTCGTTCATACTACCGATGCACTGTCTCTTCATCTTGTCCCGTAAGAAAACAGGTTCAAAGATGTGCTCAAGACATGTCAATCCTGATTACAACCTATGAAGGAACTCACAACCATCCACTTCCTTCTTCAGCCACTCCAATGGCGTCTGCAACTTCAGCCGCCGCTTCCGTTCTTCGATCCTCGTCCTTGTCCTCCTCCTCATCGCAACAAGGCATTGTACCCAATTCAGACACAACCACCATTGTCAACCCTAATAATAATAATAATAATACCCTAATAAGACCACAACAATTCTACTTGTTCAACTCTTCCATGATCTCAACCTCCAATAATAACTTTCACCCCACAATAACTCTTGACCTCATTACTAAACCTCCAACTTCATCATCATCTTCCATACCAAAATATTCACCAACAAATCTTGATTTTTCCTCAACTACTACCACTTTCTCTCCATTGCAGTATAGCACTCAACACTCATCATCGTCTCGTTATTATTGGAACCTTAATAAGAATGGAAAGCAACCATTGATTCAATATCATCAAGGCCATTATCCCTACCAACAAAATTGCATGCCCATTATTTTTCAACAACCTTTACATGCAGATTGTTATGCTTCCTCTGCTCTTAATAATAACCAACAAGGAAACATCACAAAATCATTGTTAACCTCACAACCGTCTAAAGGTTCATATGCTTCGCCGCCCTCTAAGAAAAGTTACCAGTTCTTGGAGAAAAGGAAGTGA 1170 0.3932 MGKLEVLLRNGANDEDSSSSSSSLVQKEYLFDIILQQQKHEATTKEGINNNEDSDDEELVSLSLGVSSSEKLLTEMWPPSKVLKTTKNNGEGNEASHHHYHNTRLKKARVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRSYYRCTVSSSCPVRKQVQRCAQDMSILITTYEGTHNHPLPSSATPMASATSAAASVLRSSSLSSSSSQQGIVPNSDTTTIVNPNNNNNNTLIRPQQFYLFNSSMISTSNNNFHPTITLDLITKPPTSSSSSIPKYSPTNLDFSSTTTTFSPLQYSTQHSSSSRYYWNLNKNGKQPLIQYHQGHYPYQQNCMPIIFQQPLHADCYASSALNNNQQGNITKSLLTSQPSKGSYASPPSKKSYQFLEKRK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3539 389 MobiDBLite consensus disorder prediction 365 389 - -
Ahy3g3539 389 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 71 327 IPR044810 GO:0003700
Ahy3g3539 389 SUPERFAMILY WRKY DNA-binding domain 114 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy3g3539 389 MobiDBLite consensus disorder prediction 203 230 - -
Ahy3g3539 389 MobiDBLite consensus disorder prediction 365 379 - -
Ahy3g3539 389 PANTHER WRKY TRANSCRIPTION FACTOR 72B 71 327 - -
Ahy3g3539 389 Pfam WRKY DNA -binding domain 122 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3539 389 SMART WRKY_cls 121 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3539 389 ProSiteProfiles WRKY domain profile. 116 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy3g3539 389 Gene3D WRKY domain 106 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3539 Ahy-Chr3 134341842 134344157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3539 21 262 WRKY Transcription Factor Family AT5G15130 48.207 6.01e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy3g3539 WRKY 1.10E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3539 - - adu:107481098 672.93