Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3532 ATGGCACCTAATAAAATTCAAAATTTGTTTTATTTTCTTTGTTTGGCAATTACCTTTATTCCCAGCCTCTATGCTAATGTCTTGGAGAGTGAAGCGTTTTGGCAGGACCAACTAAGAATGTTTGATTCTTACTGGAGAGAAAGAGCCGAGGTTGCTAGGCAGGAAAACGAGAAAGCCTATTTCCCTGATCCCTTTGCCATCTCCGGCAACTTCACCTCTGCCATTAGCTGGGACATTCTTGGAAGGAATGGAGGAAGAAGGTTGTTGAAAGGAAAGAACAAAGGAGCTCCATGTGTGGCGAGCAACCCCATTGACAGGTGCTGGAGGTGTGACCCACACTGGGCTGATAACCGCCAAAAGCTTGCGAATTGTGTTATGGGATTCGGCAGAAACACGTACGGAGGAAAAGGAGGAAAATACTACGTGGTCACCGACCCTTCCGACGATGAGTTGCTGGCTCCCAAGCCCGGCACTCTTCGCCATGCAGTGACAAGAACTGAACCCTTGTGGATCATCTTCTCCCGCAGCATGGTCATCACCCTCCAGCAAGAGCTCATCATGGCTGGCAACAAGACCATTGATGGAAGAGGCTTTGATGTCCACATTGCACACGGTGCTGGCATCACCATCCAGTTCATCAAGAATGTCATCATCCATGGCATCAAGGTCTACAACATCGTCGTCAAGGACGGTGGCATGATCAGGGACTCCGAGACTCATTACGGCTTCAGGACAAAGAGTGATGGTGATGGTATCTCCATCTTTGGCTCTAGCAACATCTGGATTGACCATGTTTCCATGAGAAACTGCTCCGATGGATTGATTGATGCCATTATGGGCTCCACCGCCATTACCATCTCCAACGGCCACTACACTGACCACAACGAGGTGATGCTGTTTGGAGCGAGTGACAGCTACAGCGGCGACAAGATCATGCAAATCACCTTGGCATTCAACCACTACGGCAAGAGGTGTGTTCAGAGAATGCCAAGAGCCAGATATGGTTTCGTCCATATTGTGAACAATGATTATACTCATTGGGAGATGTATGCCATTGGTGGCAGCAAGAACCCTACCCTGATCAGCGAGGGTAACAGGTTCATCGCCCCCCCAAACCGGTTTGCCAAGGAGATCACCAAGAGAGAATACACAGAAGAAAAAATATGGAAGGACTGGCAATGGAGATCAATCAATGATGAGTACTTGAATGGAGCGTTCTTCATTCAATCAGGACCTGAACTGAAGAACAGGCCATTCTCAACAAAGGATATGATCACAGCCAAGCCAGGAACATATGTTGGACAGCTAACACGCTATGCGGGTGTTCTTCCATGCAGAATTGGACATCCCTGCTAG 1356 0.4816 MAPNKIQNLFYFLCLAITFIPSLYANVLESEAFWQDQLRMFDSYWRERAEVARQENEKAYFPDPFAISGNFTSAISWDILGRNGGRRLLKGKNKGAPCVASNPIDRCWRCDPHWADNRQKLANCVMGFGRNTYGGKGGKYYVVTDPSDDELLAPKPGTLRHAVTRTEPLWIIFSRSMVITLQQELIMAGNKTIDGRGFDVHIAHGAGITIQFIKNVIIHGIKVYNIVVKDGGMIRDSETHYGFRTKSDGDGISIFGSSNIWIDHVSMRNCSDGLIDAIMGSTAITISNGHYTDHNEVMLFGASDSYSGDKIMQITLAFNHYGKRCVQRMPRARYGFVHIVNNDYTHWEMYAIGGSKNPTLISEGNRFIAPPNRFAKEITKREYTEEKIWKDWQWRSINDEYLNGAFFIQSGPELKNRPFSTKDMITAKPGTYVGQLTRYAGVLPCRIGHPC* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 124 141 IPR018082 -
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 248 269 IPR018082 -
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 392 416 IPR018082 -
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 148 173 IPR018082 -
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 350 369 IPR018082 -
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 184 200 IPR018082 -
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 328 347 IPR018082 -
Ahy3g3532 451 PRINTS Pollen allergen Amb family signature 422 445 IPR018082 -
Ahy3g3532 451 Gene3D - 101 444 IPR012334 -
Ahy3g3532 451 Pfam Pectate lyase, N terminus 40 89 IPR007524 GO:0030570
Ahy3g3532 451 SMART amb_all 176 373 IPR002022 -
Ahy3g3532 451 PANTHER PECTATE LYASE 18-RELATED 6 451 IPR045032 GO:0030570
Ahy3g3532 451 PANTHER PECTATE LYASE 6 451 - -
Ahy3g3532 451 SUPERFAMILY Pectin lyase-like 102 442 IPR011050 -
Ahy3g3532 451 Pfam Pectate lyase 190 367 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3532 Ahy-Chr3 134309182 134311301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3532 40 451 Polysaccharide Lyase AT1G14420 59.016 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3532 K01728 - gmx:100798579 686.411