Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy3g3511 | ATGGGTGCAGGGGACTACTACAAGGTTCTGAAGGTGAATCGTCACGCCACAGAAGAGGAGCTTAAGAAAGCATACAAGAGGCTTGCAATGAAGTGGCATCCAGATAGGAACCACCATCAAGAAGTGAAGAACAAGGAAGAAGCTGAAGCAAAGTTCAAGCAGATATCTGAGGCCTATGATGTCTTGAGTGACCCCAAAAAGCGCCAGATCTATGATTTCTATGGCCACTACCCTCTCAATTCCATGAAGGTTAACAAAAAGGAACAAGACTGTGATGGTAGAAATAATAATGTGAAGGAGGAGAAAGCAGGGGTGGTGGTTGAGACCAAACTTGTGTGCACCCTTGAGGAGCTTTACAAAGGTTGTAGGAAGAAGTTGAAGATCTCAAGAAATGTTGTTGATGAACTCGGCAGCAAGTTGAAGTGTGTGGAAGAAACCTTGAAGATAGACATTAAACCAGGTTGGAAAAAAGGAACAAAGATAACATTCCCTGGAAAAGGAAACCAAGAACAAGGAGGGTCTCAACCTTCTGATCTAGTCTTTGTAGTGGATGAGAAACCACATGCTGTGTTCAAGAGAGATGGAAATGACTTGGTGATCACACAGAAGATCTTGCTTGTGGAGGCACTCTCAGGGAAGACACTCAACTTGACAACCTTGGACGGAAGAGAAATCGCCATTGAAGTGACCGATGTTGTGAAACCGAGGCATGTTATGGTGGTCCCAAATGAAGGGATGCCAATTTCTAAAGAACCAGGGAAGAAAGGATCCTTGAGAATCAAGTTTGATGTTATGTTCCCTTCAAGGCTTTCCACACATCAGAAGCATGAGCTTAAGAAGATTATGAGAAAGGATTATAAACTGTCATCATGA | 873 | 0.4318 | MGAGDYYKVLKVNRHATEEELKKAYKRLAMKWHPDRNHHQEVKNKEEAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSMKVNKKEQDCDGRNNNVKEEKAGVVVETKLVCTLEELYKGCRKKLKISRNVVDELGSKLKCVEETLKIDIKPGWKKGTKITFPGKGNQEQGGSQPSDLVFVVDEKPHAVFKRDGNDLVITQKILLVEALSGKTLNLTTLDGREIAIEVTDVVKPRHVMVVPNEGMPISKEPGKKGSLRIKFDVMFPSRLSTHQKHELKKIMRKDYKLSS* | 291 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy3g3511 | 290 | PRINTS | DnaJ domain signature | 25 | 40 | IPR001623 | - | |
| Ahy3g3511 | 290 | PRINTS | DnaJ domain signature | 47 | 67 | IPR001623 | - | |
| Ahy3g3511 | 290 | PRINTS | DnaJ domain signature | 7 | 25 | IPR001623 | - | |
| Ahy3g3511 | 290 | PRINTS | DnaJ domain signature | 67 | 86 | IPR001623 | - | |
| Ahy3g3511 | 290 | SUPERFAMILY | Chaperone J-domain | 4 | 80 | IPR036869 | - | |
| Ahy3g3511 | 290 | CDD | DnaJ | 5 | 64 | IPR001623 | - | |
| Ahy3g3511 | 290 | Pfam | DnaJ domain | 5 | 72 | IPR001623 | - | |
| Ahy3g3511 | 290 | Pfam | DnaJ C terminal domain | 107 | 267 | IPR002939 | - | |
| Ahy3g3511 | 290 | Gene3D | - | 105 | 186 | - | - | |
| Ahy3g3511 | 290 | ProSiteProfiles | dnaJ domain profile. | 5 | 75 | IPR001623 | - | |
| Ahy3g3511 | 290 | SMART | dnaj_3 | 4 | 67 | IPR001623 | - | |
| Ahy3g3511 | 290 | Gene3D | - | 188 | 268 | - | - | |
| Ahy3g3511 | 290 | ProSitePatterns | Nt-dnaJ domain signature. | 52 | 71 | IPR018253 | - | |
| Ahy3g3511 | 290 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 284 | - | - | |
| Ahy3g3511 | 290 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 108 | 188 | IPR008971 | GO:0006457|GO:0051082 | |
| Ahy3g3511 | 290 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 190 | 276 | IPR008971 | GO:0006457|GO:0051082 | |
| Ahy3g3511 | 290 | PANTHER | DNAJ HEAT SHOCK FAMILY PROTEIN | 1 | 284 | - | - | |
| Ahy3g3511 | 290 | Gene3D | DnaJ domain | 1 | 97 | IPR036869 | - | |
| Ahy3g3511 | 290 | CDD | DnaJ_C | 107 | 270 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy3g3511 | Ahy-Chr3 | 133968587 | 133971420 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy3g3511 | 6 | 72 | C2H2 Transcription Factor Family | AT1G74250 | 38.806 | 1.87e-10 | 59.3 |