Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3484 ATGGAAAAGAATAATGTCTATGATGCGTCAACATGGGATGATGGTGTTGAAGATAATAATGGGCATTCATCAAAACACAAGAGGCTCAAGTTATTTGGGTTTGAACTAATAAACCCAAAGGATCATTCAGAAGTAGTAATGGAAGATGAAAGTGTGAATTCTTCAAATTCAGCTTCATTATTATTAGAGGGAGACCATGATGAGAAAAATAATAATAATAAAAAATTAGAGTGTCAATATTGTTACAAGGAATTCGCAAATTCGCAAGCATTAGGAGGACACCAAAATGCACACAAAAAAGAGAGAATGAAGAAGAAGAAGTTGCAGCTTCAAAAAACAAACGCTACCACAATCAACCACTACCTTCTAAAGCAAGCAAGCTCTAATATCAATAATATTATTGATAATTATTGGTTATATAATCCTTCTTCCTTTGTTAGTAATAATTCTGAATCTCAGATTAGCTTTAATAATAATGATCAAGATGATGATGATGGTCTTATTCATGTTTCAAAGTGGCATGTTCCTAATTCTCATGATCAACAAGAAAATTATTGTATGTTCAATTTCTCCCATGCTAGTTCGAATCATCATCAGGGACATGTCAAAGGTTTGGATCTTCAGCTAGGCCTCAGCTTGGAGTCAAATACAAGAACTTTTTTATGGAGAACATAG 675 0.3319 MEKNNVYDASTWDDGVEDNNGHSSKHKRLKLFGFELINPKDHSEVVMEDESVNSSNSASLLLEGDHDEKNNNNKKLECQYCYKEFANSQALGGHQNAHKKERMKKKKLQLQKTNATTINHYLLKQASSNINNIIDNYWLYNPSSFVSNNSESQISFNNNDQDDDDGLIHVSKWHVPNSHDQQENYCMFNFSHASSNHHQGHVKGLDLQLGLSLESNTRTFLWRT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3484 224 MobiDBLite consensus disorder prediction 1 24 - -
Ahy3g3484 224 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Ahy3g3484 224 SUPERFAMILY beta-beta-alpha zinc fingers 72 103 IPR036236 -
Ahy3g3484 224 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Ahy3g3484 224 PANTHER ZINC FINGER PROTEIN 5 6 211 IPR044299 GO:0010090
Ahy3g3484 224 PANTHER ZINC FINGER PROTEIN 5 6 211 - -
Ahy3g3484 224 Gene3D Classic Zinc Finger 51 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3484 Ahy-Chr3 133664712 133665555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3484 28 142 C2H2 Transcription Factor Family AT1G68360 37.405 1.98e-17 76.6