Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3474 ATGCCTCTTTGCCACCATGACCTCCTCTGCTGCGAGGACTCCTCCGGAATCCTCTCCACACAACACTCGCCGGAATCACCTTCATCATCATCGTCTTCTTCGTCTTCTTCATTGTCGTCGTCGTGGACGGAGGAATCCATCGCGTGTTTCATGGAGCACGAACGCAACTTCGTCCCCGGATTGGAGTACCTCTCCAGGTTTCAGTCTCGCTCCCTCGACGCCAACGCAAGAGAACAATCCGTTGCATGGATCCTCAAGGTTCACTCGTACTATGGCTTTCAGCCTCTGACGGCATACCTCTCCGTTAATTACTTGGATCGGTTTTTGGACTCTCGCCAGCTGCCGCAAACAAGTGGGTGGACTCTTCAGCTTCTAGCAGTTGCTTGTTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTTGTTCCCTCTCTCTTGGACCTTCAGGTGGAAGGAGCCAAATACGTATTTGAGCCGGGAACCATACGTAGGATGGAGCTACTTGTTCTTAGTGTGTTGGATTGGAGGCTTAGATCAGTTACCCCACTTAGCTTCCTTGATTTCTTTGCGTGCAAAATTGATTCAGCTGGAAATTCTACTCCCTTCCTCATTTCTCGAGCTACGGAAATCATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACAGGCCATCATGTATTGCTGCCGCAGCAATACTCTGTGCAGCTAATGAAATTCCTAATTGGTCTCTTGTTAAGCCTGAGAATGCTGAATCATGGTGCCAGGGACTAAGAAAAGAAAAAATTATAGGGTGCTACCAGTTGATGCAAGAACTTATTGTGATTCACAGTAATCGGAGAAATCCACCTAAGTATTTGCCACAGATGCGAGTAACAACTAGGACCCGAATGAGGTCGAGTACTATCACTGTTGCATCATCATTCCCCTCGCCCTCTTCTTCATTATCCTTGTCTTACAATAAAAGGAGAAAATTAAATGACAGTTTGCGGGTGAATGAAGATGAAAAGGGAAACTCCGTGTGA 1023 0.4682 MPLCHHDLLCCEDSSGILSTQHSPESPSSSSSSSSSSLSSSWTEESIACFMEHERNFVPGLEYLSRFQSRSLDANAREQSVAWILKVHSYYGFQPLTAYLSVNYLDRFLDSRQLPQTSGWTLQLLAVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPGTIRRMELLVLSVLDWRLRSVTPLSFLDFFACKIDSAGNSTPFLISRATEIILSNIQEASFLAYRPSCIAAAAILCAANEIPNWSLVKPENAESWCQGLRKEKIIGCYQLMQELIVIHSNRRNPPKYLPQMRVTTRTRMRSSTITVASSFPSPSSSLSLSYNKRRKLNDSLRVNEDEKGNSV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3474 340 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Ahy3g3474 340 Gene3D - 60 177 - -
Ahy3g3474 340 CDD CYCLIN 77 169 IPR013763 -
Ahy3g3474 340 Gene3D - 50 240 - -
Ahy3g3474 340 MobiDBLite consensus disorder prediction 20 39 - -
Ahy3g3474 340 SUPERFAMILY Cyclin-like 39 176 IPR036915 -
Ahy3g3474 340 SMART cyclin_7 82 170 IPR013763 -
Ahy3g3474 340 SMART Cyclin_C_2 179 305 IPR004367 -
Ahy3g3474 340 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 27 324 - -
Ahy3g3474 340 SUPERFAMILY Cyclin-like 161 280 IPR036915 -
Ahy3g3474 340 Pfam Cyclin, N-terminal domain 47 176 IPR006671 -
Ahy3g3474 340 Pfam Cyclin, C-terminal domain 179 280 IPR004367 -
Ahy3g3474 340 PANTHER CYCLINS 27 324 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3474 Ahy-Chr3 133595704 133599871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3474 7 303 Core Cell Cycle Gene Families AT1G70210 64.214 1.12e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3474 K18810 - gmx:100778578 463.381