Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3468 ATGGCTTCGCCGTCTCCATCAATGGAAAGAAGGTCTGAAATTGTCTTTGAAGTACATCCCCCAATTTTGTGTGTTTCGCTAAATTACCGCGTTGTTGCTGTTTGGCACAGGATTGCCGGGGATGAAGATACCACTGGGGGCGAAGCAGACCATGGAGTTGGATCGGTTGAGGGCGAAGGCTTTGCAGGGTTGGAGTCGGACGAGTACGATTTACAGGAAGATGAAACAGAAAACGACCATCCGGTTGAGGGCGAACACTCTACAGGGATGGAGTCGGACGAGAACGACTTTCAGGAAGATGATACAGAACACGACCATCATGCAGAGGCCGATGTTAACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGCAATGTCTGAGAATTATGCAGAAGACGAGTTTTACGCCGTTGATTCCGGAGAGTCCATAGGTTGGATTGATTTTTTGAACTTGAGCGCGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAAAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTTCCGATCCCCGAAGTTCTACTCGATGCCCCAGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTTCTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCGGGCCATCGGAGGATGAGCAAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGACAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACACTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACATGGTTGCATTTGATGCAACGTACAAGAAAAACGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCATAACCAAATGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAGCAGTTGCAAACTTCAATGAAAAGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGCCTGCGATCTAG 1374 0.508 MASPSPSMERRSEIVFEVHPPILCVSLNYRVVAVWHRIAGDEDTTGGEADHGVGSVEGEGFAGLESDEYDLQEDETENDHPVEGEHSTGMESDENDFQEDDTEHDHHAEADVNNGDAVELEDSLDGAGAMSENYAEDEFYAVDSGESIGWIDFLNLSAEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSKSEKRGEVRIRQEFVCHRQGFRSPKFYSMPQQKRPRAETRCGCPARMLLRMDDESGRWHVAFFSDAHNHHVLELRFSSMLPGHRRMSKADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRRQGGLDAESCLRYLRECKANDPALYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDMVAFDATYKKNVYLSPLVVFSGVNHHNQMVVFAAALVADEKEETYVWLLQQLQTSMKRKAPVSIITDGDRQMKPAI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3468 457 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 161 457 IPR031052 GO:0006355
Ahy3g3468 457 MobiDBLite consensus disorder prediction 79 93 - -
Ahy3g3468 457 MobiDBLite consensus disorder prediction 71 117 - -
Ahy3g3468 457 Pfam FAR1 DNA-binding domain 174 262 IPR004330 -
Ahy3g3468 457 MobiDBLite consensus disorder prediction 100 114 - -
Ahy3g3468 457 Pfam MULE transposase domain 383 457 IPR018289 -
Ahy3g3468 457 PANTHER OS02G0262500 PROTEIN 161 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3468 Ahy-Chr3 133559270 133560705 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g3468 FAR1 3.50E-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3468 - - ahf:112783094 939.488