Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3461 ATGAGTTTGAGTGCGAGCTATTGTGCAAGTTTCGGTCTTCGTCTTCGACCTTGCGGAGTTGCAAACTGCAATCTTGAACGACATGGCAGGAATATTGTTCTTATCAACACATCGAAGGAACTTCCAAAATGTGACAATTGTCTTCAATCAAAGTTGAAGATTGGTACTAGCAATAGTGTGAAGACATTAATGGGTGCCATGGCAGTGACACACTTGATTGCTCCAGTTGCTGCAAAAGCTGAAGTAGCTGCTTCTGTTTATTCTTTGGCTGATGCAAACCTAAGTGACTGGTTTGGAGGCTTATTGTATTCAGCTGGACAACAGGCCAATGAAGCTGTTCAGAGTCAATTATCTTCTCCCAGTTTCACTAGTTTGGCAGTAATTTTTGGGGCAGGGCTTGTGACCAGTCTTTCTCCTTGTACACTCAGTGTCTTACCGTTGACCCTTGGTTACATTGGGGCATTTGGCTCTGGAAAAAGTAGAGCAGAGGTTATTGGGGATTCAATTGCATTCTCCTTGGGTCTTGCAACAACATTAGCCCTTTTGGGAGTCGCTGCATCCTTTGCTGGAAAGGCTTATGGACAGATAGGCCAAGGATTACCACTGGCTGCTTCTGGTTTGGCTGTAATTATGGGTCTGAACCTTCTTGAGATCATTGAATTGCAGCTCCCCTCGTTCTTCGACAGTTTTGATCCACGTGCAGCAGCTGCCAATTTCCCATCAAGTGTGCAAGCATATCTGGCTGGGCTTACATTTGCTTTAGCTGCCTCGCCTTGCAGCACACCTGTACTGGCAACTCTTCTAGGTTATGTTGCTGCATCCAAGGATCCAGTGATTGGAGGCAGCTTACTTTTGACATACACAACTGGTTATGTTGCTCCCTTACTCTTAGCTGCTTCTTTTGCTGGAGCATTACAGAGCTTGCTTTCATTTCGCAAGTTCTCAGCATGGATCAATCCCATAAGTGGAGCAATGCTGCTAGGAGGTGGTGTGTATACTTTCTTAGATAGGCTGTTCCCTGCAACAATGGTGATGTAG 1038 0.4538 MSLSASYCASFGLRLRPCGVANCNLERHGRNIVLINTSKELPKCDNCLQSKLKIGTSNSVKTLMGAMAVTHLIAPVAAKAEVAASVYSLADANLSDWFGGLLYSAGQQANEAVQSQLSSPSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGDSIAFSLGLATTLALLGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3461 345 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 57 345 - -
Ahy3g3461 345 Pfam Cytochrome C biogenesis protein transmembrane region 128 335 IPR003834 GO:0016020|GO:0017004
Ahy3g3461 345 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 57 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3461 Ahy-Chr3 133479640 133486997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3461 1 345 Chloroplast and Mitochondria Gene Families AT5G54290 69.274 1.12e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3461 - - gmx:100807029 546.584