Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3452 ATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACAACATTTCCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAGTCCAGTTTCTGTTCTTGATCTGCAATTTTACAGTGAAGACCCACCTTCTCCAATCAAAAAGAAGACAGAAATCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTTATAACATAGGGCATGCATTGGACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATAAAGTTCTTTGGCAAAATGACGATAATAGCGAGAAATTCACCAATTGCAGAGAGAGAAAAGATTCCGACCGTAAATACATAGCAGAAATATTGCTCGCATCAGGGCTGCTCAGTAGCCCCAGCTTAATCCAGGCAGTTCATTCACCAGGTCACCTGATAAACCCAAAGTTGTTCTTTGCACTTGAACTATTGAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGCTGGAAAGATTCTTAGGATAAATAATCTTGAAGAAATGCAAAGAAAACTCATATTTGATGTTGTCAATGAGATTCTAGTACAAAAAATTAGTGCCTTAATATATGTATATTTTGGCTAA 723 0.3831 MDSHRDIEGTQADHSESNNNISIQQVTHMNQNTATKELSKESAMAMITVTSEQQSPVSVLDLQFYSEDPPSPIKKKTEISKDLDEALATPYNIGHALDLPLSFNNTKANFSNGTSDDDLQTQNLDKVLWQNDDNSEKFTNCRERKDSDRKYIAEILLASGLLSSPSLIQAVHSPGHLINPKLFFALELLKTNKLQFNMKHNAGKILRINNLEEMQRKLIFDVVNEILVQKISALIYVYFG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3452 240 PANTHER LONGIFOLIA PROTEIN 6 232 IPR033334 GO:0051513
Ahy3g3452 240 Pfam Domain of unknown function (DUF4378) 149 232 IPR025486 -
Ahy3g3452 240 PANTHER LONGIFOLIA PROTEIN 6 232 - -
Ahy3g3452 240 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3452 Ahy-Chr3 133345578 133346633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3452 8 234 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 32.500 6.85e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3452 - - adu:107484478 465.692