Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3439 ATGCAGTGCGATCTCGTTGAACCCCTAGGCTGTGATATGTCTACCGTTGCAATGGTTTCATCAGACCAACCTCAAAACATATCCGGTGATGTTGTCGTCGGCGTTGAGAAGTCAAACCAGGCTACGCAGTTGTCGGATGTTATGGATATTGGAAGTGAAGAGATGGAGCTTGGTGATGAGTTACCAGATCATGGTTGCCTACAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTGCTCAGTTACAGATGACTCATGACTTTTATGTTACCTATGCAAAGAAAGTTGGATTTGCAACTAAGATAAAGACGACAACATTTGACAAGATCACAAAGGCTCTCGTTAACCAAGTTATACAATGTAACCGCGACGGGTACCGCGAGTCTCGTGTTAAAGCACCAACGCGAAAGAATACGATTTCAGCTGCTGGGTGCAAGACAAAGATATATGTAAAGTTTGATAAAGACGTGTAA 474 0.4346 MQCDLVEPLGCDMSTVAMVSSDQPQNISGDVVVGVEKSNQATQLSDVMDIGSEEMELGDELPDHGCLQEDEIPRVGMRFAQLQMTHDFYVTYAKKVGFATKIKTTTFDKITKALVNQVIQCNRDGYRESRVKAPTRKNTISAAGCKTKIYVKFDKDV* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3439 157 Pfam FAR1 DNA-binding domain 87 155 IPR004330 -
Ahy3g3439 157 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3439 Ahy-Chr3 133188290 133189953 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g3439 FAR1 4.40E-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3439 - K12844 ahf:112783013 307.375