Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3429 ATGAGTGATTCTACAGTTTTAGAGTGGCTTAGGCCCTTTGTTGAGGCCAAAGCTTGGGACTTTGTGGTTGTTTGGAAATATGGGGATGACCCTACTAGCTTCTTTGAGTGGTTGGGTTGTTGCTGTAGTGGGAGCTGTGGTGAAAGCATTGAGGATGCAAAGAAGCTCAAAGATGAAGAAACGGATGAAAAACAGAACGACATAGATTCTTCTTCCATTTGCAAGGATGCACATTTTCAGCATCCAATTAGAACCAAGGCTTGTAAGGCTCTTTATCAGCTTCCTTTTGCAATGTCTCTCTATTCTGGTGTCCATGGAGAGGTTGCAATATCGCAGCAACCAAAATGGCTTACTCATGGAGAGGAAATTGGAACACAAGTTTTGATCCCTGTTGTTGGTGGTCTTGTTGAGCTCTTCACGACAAAGCTTGTTCCAAAAGACAATAACATCTTAGAGTTCATAAGAGCACATTGCTATGTTTCATTGAAGCAAGAAGCTATATGTGCACAGCACCACACCGATGTGAACTTCAGTGAAAATCTGTCATCAGAAGAACAATACACACAGAGCTCGCCACAACTTGCGTCAACTTTAACTGACGGTGTCCATCTTCTTGCAGCAAATTGGTGCAAATCGGATCCTTACATTGAAGAACCTTCCAGTGGATCTAATCCTTCAAGCGAATACACATCATTTGATTCGAAATTTGTCTGCTTGACTCACCATGAATATCTGGGTGAGTCGGTTAAATTATCACCTACCTGCAAAACCGAAAGGCCTAAGTACAATGAAACTTCAGGGAAGCAGCAAGGAACTTTGAGTTCCTATTGTGGCAATGGCAAAAGAAATAAAACAAAATCAGTCAGGGTGCCTCCGAAGGAAGGTTACCATGCTAAAAATCTTGCCACAGAGAGGAGAAGAAGAAACAAGATTAAAAATGGCCTTTTCACTTTAAGGTCTCTAGTCCCAAAGATAACCAAGATGGATAGAGCATCAATTCTAGCAGATGCAATTGACTACATTAAGGAACTGCATGGACAAGTAGAAGATCTAAAAGATGAGGTCAGGAATTTGGAAGTAGAAGACTGCGAAAAGAACACACCGCAATCAATTATGCCAACAAGTAAAGAACAAGGAGAAAACAGAACTCTCCTTGCTGAGCTCAATCAAAGTTCTTCTAATTCCACTAAACAGATAGAGATGAAGATGCAAACCGAAGTGAATCATATAAGCAGGACAGAGTTCTTGCTTAAGGTATGCTGGGAGCAGAAGCCAGGTGGGTTTTCAAGGTTGATGGAAGTTATAAATTCATTTGGATTTCAGGTGGAAACTGCCAATATGACCACAATTGACGGAAAGGCTCAGATCATTCTAACAGTTGAGGCAGCCAAGGAGGGAATTCACCCAACTAAGCTGAAGGATTTTTTGACAGAGCAAACAGGTTGA 1446 0.4149 MSDSTVLEWLRPFVEAKAWDFVVVWKYGDDPTSFFEWLGCCCSGSCGESIEDAKKLKDEETDEKQNDIDSSSICKDAHFQHPIRTKACKALYQLPFAMSLYSGVHGEVAISQQPKWLTHGEEIGTQVLIPVVGGLVELFTTKLVPKDNNILEFIRAHCYVSLKQEAICAQHHTDVNFSENLSSEEQYTQSSPQLASTLTDGVHLLAANWCKSDPYIEEPSSGSNPSSEYTSFDSKFVCLTHHEYLGESVKLSPTCKTERPKYNETSGKQQGTLSSYCGNGKRNKTKSVRVPPKEGYHAKNLATERRRRNKIKNGLFTLRSLVPKITKMDRASILADAIDYIKELHGQVEDLKDEVRNLEVEDCEKNTPQSIMPTSKEQGENRTLLAELNQSSSNSTKQIEMKMQTEVNHISRTEFLLKVCWEQKPGGFSRLMEVINSFGFQVETANMTTIDGKAQIILTVEAAKEGIHPTKLKDFLTEQTG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3429 481 MobiDBLite consensus disorder prediction 258 282 - -
Ahy3g3429 481 MobiDBLite consensus disorder prediction 257 289 - -
Ahy3g3429 481 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 156 IPR025610 -
Ahy3g3429 481 Coils Coil 334 361 - -
Ahy3g3429 481 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 295 344 IPR011598 GO:0046983
Ahy3g3429 481 PANTHER TRANSCRIPTION FACTOR BHLH90 68 480 - -
Ahy3g3429 481 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 68 480 - -
Ahy3g3429 481 Gene3D - 291 362 IPR036638 GO:0046983
Ahy3g3429 481 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 296 362 IPR036638 GO:0046983
Ahy3g3429 481 Pfam Helix-loop-helix DNA-binding domain 302 344 IPR011598 GO:0046983
Ahy3g3429 481 ProSiteProfiles ACT domain profile. 416 481 IPR002912 -
Ahy3g3429 481 SMART finulus 301 350 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3429 Ahy-Chr3 133039219 133042127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3429 98 476 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10610 27.320 1.60e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g3429 bHLH-MYC_N 9.60E-17 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3429 - - gmx:100807261 542.347