Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3400 ATGAATTCAGTCATAAGCAATATAGCTGTAACATATTCTAATTCAATAGTCTTCTTGCCTTGCAGCTGCTTGATGAAAGTCCCAGCAATGGAAAAGAAACTAGTCTCTCTTGTCTATCCCCAGATCCTTGTTTTCCTCCTCATCAAATCTCTGTTACTGTTAGATTCAGTGGTAGCAGAACCAAGGGCCAAAACAGTTGAAGTAACATGTGGCCATCAACTAGAGCACAACACTACCATCTTTGTTCCGAATTTCATTGCAACCATGGAGAAGATAAGCCAACAAATGCGCAGTACCGGCTACGGCACAGCAGTTACAGGGACAGGACCAGACATAGACTATGGCCTGGCACAGTGCTATGGAGATCTTTCACTTCTTGATTGTGTGTTATGTTATGCCGAGGCACGCACGGTTCTTCCTAAATGCTTCCCAAACAATGGTGGCCGCATATTTCTTGATGGATGCTTCATGAGGTCTGAAAATTATAGCTTCTTTGATGAGTATGCAGGGCCAGGGGACAAGGCTGTTTGTGGCAACAAAACTAGGAAGAACTCGAGTTTTCAAGCAGCCGCGAAGCAGGCGGTTTTGGAAGTAGTGCAAGCTGCACCAAACAGCAAAGGATACTATGCAAGAGGGAAGGTTGATGTTTCTGGAAGGGTAAATGAATCTGCTTATGTTTTGGCTAATTGTTGGAAGAGTTTGAACAGTAGTTCTTGCAAAGTATGTCTTGAGAATGCTTCTAAATCTGTGTTGAAATGCTTGCCTTCTTCAGAAGGTAGAGCACTGAACACTGGCTGCTTCATGAGGTATTCTGACACAGATTTTCTTAACAAGGAGCAGAATAATGGAAGATCAAGAGGTACTCTTATAGTGATAGTGGTTGCAGTAGTTAGTGCAGTGATTGTTTTGGTAGTTGGAATAGCTATTGGGGTCTATATAAGGAAAGATAGATACATTCAAAGAAAAAGAAGAGGTTCAAATGATGCAGAGAAGTTGGCTAAGACACTTCACCGCAACAGCTTGAATTTCAAGTACTCTACACTGGAGAAGGCTACCAACTCCTTCAACGAAGCGAACAAGCTTGGACAGGGAGGATTTGGATCGGTTTATAGAGGTGTTCTGCCTGATGGAAGAGAAATTGCCATCAAGAGGTTGTACTTCAACAACAGGCATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGCGTGGAGCACAAGAATCTAGTGAGGTTGTTAGGATGCAGCTGTTCTGGACCCGAAAGCTTGCTCGTATATGAATTTCTACCGAACAAAAGTCTTGATCAATTTATTTTTGATAGAGTCAAGGGAAGAGAACTAAACTGGGAGAAGAGATATGACATTATCATTGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAATTCAAAAACTAGGATAATTCATAGAGATATAAAAGCCAGCAACATCTTACTGGATGCTAAACTTCGCGCCAAAATTGCTGATTTTGGACTGGCCAGGTCCTTTCAAGAAGATAAGAGTCACATTAGCACGGCTATAGCCGGAACTCTGGGTTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTATATAGTTTTGGAGTGTTAGTCTTAGAAATAGTTACTGGGAGACAGAATAACAGAAGCAAATCAACAGAATACTCAGACAGCATAGTTATACTGACATGGAGGCATTTCCAATCAGGGACAGCAGAAGAGCTATTTGATCCAAATCTAGCTTCAGATGACAACAATAATGTTAATAAGAAGGATGAGATTTTAAGAGTGGTGCACATAGGACTTCTATGCACACAAGAGAACCCTTCCTTGAGGCCAACCATGTCAAGGGCACTACAGATGCTAACAAAGAAGGAAGAGAATCTTGCACGTCCCTCTAATCCACCCTTCACAGATGAGAACACAATGGAACTCAATGACACTGTTGATAACCCATTTTGCCCTCTCAATAATGCAACATATTCATCAGAGGCTACTATGTCCCATAGTTCTTTCTATGCAAGGTGA 2052 0.4181 MNSVISNIAVTYSNSIVFLPCSCLMKVPAMEKKLVSLVYPQILVFLLIKSLLLLDSVVAEPRAKTVEVTCGHQLEHNTTIFVPNFIATMEKISQQMRSTGYGTAVTGTGPDIDYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPNNGGRIFLDGCFMRSENYSFFDEYAGPGDKAVCGNKTRKNSSFQAAAKQAVLEVVQAAPNSKGYYARGKVDVSGRVNESAYVLANCWKSLNSSSCKVCLENASKSVLKCLPSSEGRALNTGCFMRYSDTDFLNKEQNNGRSRGTLIVIVVAVVSAVIVLVVGIAIGVYIRKDRYIQRKRRGSNDAEKLAKTLHRNSLNFKYSTLEKATNSFNEANKLGQGGFGSVYRGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDQFIFDRVKGRELNWEKRYDIIIGTAEGLVYLHENSKTRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLVLEIVTGRQNNRSKSTEYSDSIVILTWRHFQSGTAEELFDPNLASDDNNNVNKKDEILRVVHIGLLCTQENPSLRPTMSRALQMLTKKEENLARPSNPPFTDENTMELNDTVDNPFCPLNNATYSSEATMSHSSFYAR* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3400 683 Pfam Protein tyrosine and serine/threonine kinase 358 628 IPR001245 GO:0004672|GO:0006468
Ahy3g3400 683 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 42 662 - -
Ahy3g3400 683 SMART serkin_6 355 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3400 683 Gene3D Phosphorylase Kinase; domain 1 316 430 - -
Ahy3g3400 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Ahy3g3400 683 ProSiteProfiles Gnk2-homologous domain profile. 63 164 IPR002902 -
Ahy3g3400 683 Gene3D - 174 275 IPR038408 -
Ahy3g3400 683 Gene3D - 63 164 IPR038408 -
Ahy3g3400 683 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 42 662 - -
Ahy3g3400 683 ProSiteProfiles Protein kinase domain profile. 355 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3400 683 Pfam Salt stress response/antifungal 177 272 IPR002902 -
Ahy3g3400 683 Pfam Salt stress response/antifungal 80 162 IPR002902 -
Ahy3g3400 683 Gene3D Transferase(Phosphotransferase) domain 1 431 641 - -
Ahy3g3400 683 SUPERFAMILY Protein kinase-like (PK-like) 339 651 IPR011009 -
Ahy3g3400 683 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Ahy3g3400 683 CDD STKc_IRAK 361 632 - -
Ahy3g3400 683 ProSiteProfiles Gnk2-homologous domain profile. 169 275 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3400 Ahy-Chr3 132736133 132740326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3400 34 683 Receptor kinase-like Gene Family AT1G70520 66.769 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy3g3400 PK_Tyr_Ser-Thr 1.20E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3400 - - aip:107631343 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1380 15 23599462 23602689 Ahy3g3400 3 132736133 132740326 hybridization
Ahy5g1250 5 33919166 33922610 Ahy3g3400 3 132736133 132740326 PCT
Ahy3g3400 3 132736133 132740326 Ahy5g1247 5 33885091 33888271 PCT