Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3383 ATGACAACTCGCTTCAAGAAGAACCGCAAGAAGCGCGGTCACGTGAGCGCTGGGCACGGTCGTATCGGAAAGCACCGTAAGCACCCAGGAGGTCGTGGTAACGCCGGTGGCATGCACCACCACAGAATCCTGTTTGACAAGTACCATCCCGGTTACTTCGGTAAGGTAGGTATGCGGTATTTTCACAAGCTCCGCAACAAGTTCCATTGCCCAATCGTTAACATCGACAAGCTGTGGTCATTGGTCCCGCAAGAGGTGAAGGATAAGGCCTCTAAGGAGAAGAAGGCTCCATTGATCGATGTAACTCAGCATGGTTACTTCAAGGTCTTGGGAAAAGGTGTGCTCCCTCAGAACCAGCCTGTTGTCGTCAAGGCTAAGCTTATTTCCAAGGTCGCCGAGAAGAAGATCAAGGAGAACGGTGGCGCCGTCCTTCTCACCGCTTAG 444 0.5248 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSLVPQEVKDKASKEKKAPLIDVTQHGYFKVLGKGVLPQNQPVVVKAKLISKVAEKKIKENGGAVLLTA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3383 147 ProSitePatterns Ribosomal protein L15 signature. 108 140 IPR001196 GO:0003735|GO:0005840|GO:0006412
Ahy3g3383 147 MobiDBLite consensus disorder prediction 1 35 - -
Ahy3g3383 147 PANTHER 60S RIBOSOMAL PROTEIN L27A-3 1 147 - -
Ahy3g3383 147 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 147 - -
Ahy3g3383 147 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 IPR021131 -
Ahy3g3383 147 Hamap 50S ribosomal protein L15 [rplO]. 1 146 IPR030878 GO:0003735|GO:0006412|GO:0015934
Ahy3g3383 147 Gene3D - 58 147 - -
Ahy3g3383 147 SUPERFAMILY Ribosomal proteins L15p and L18e 6 146 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3383 Ahy-Chr3 132528716 132529407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3383 1 147 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 87.075 1.66e-91 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3383 K02900 - gmx:100802235 290.426