Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3377 ATGGAAGAAGCGTTTAGGCGTCTCAACGGCATGCCTCTGATCCAAGAACCCGACCCGATACAAGACTCAACCATCGCCGACCACCAGAAGAAAGCCAACAACAAGAGGATGGCCAAGGACGGCGGCGGCGGCTCTGCCGCGGGGCCAATGAGGTACCGCGGCGTCAGGCGGAGGCCGTGGGGGCGTTACGCGGCGGAGATAAGGGACCCGCAGTCGAAGGAGCGGCGGTGGCTGGGGACGTTCGACACGGCGGAGGAAGCTGCCTGCGCCTACGACTGTGCCGCCAGAGCGATGCGAGGCGCGAAGGCGAGGACGAACTTCGTGTACCCTGATTCTCCTCCTCATCCTCATCCACACCATCACCATCACAATTTTCGTCACTCTGAACTGTTCCAAGCGTTCAACTTCCCGAAGCAGCAGTGCCACGTCAGCAAGTTAGTTCAGAGCGGCCGCCATGGCTTAACTGCTCCATTATCGACTCAGCAGCAGCACCGAAACGTCGCTAACAATTCTCATCATTCCCTGAACATGCTTCTGTTCCGCGAGTTTCTGAATTCGAATCCGTGTTTGGTTTCTTCTTCTTCTGCTGCTGCTGCTGGTGGTGTTGGTTCTAGTGGTGCTAATAATAGTCCTTATCAGTATTGCATGAAGGAGGGTGGTTCCGCTTGCTGCTTCAATGGTAACTGTTGCGGTGGTGGTTCCAACAACGGCACGACGGAGGTTATTGCTGAAGGTGTCGAGGAAGAAGATCAGTCGTTATTGGAGTTGTTCCCTAGAGAGTCTTCAGACTCTGGTCTGTTGGAAGAGATAGTTCAACGCTTCTTGCCGAAATCCAAAACCGTTCCAAACAAGAATTGCGACAGCACTTTGAAGCTGAAACCCGAGGCGGCGGCAGTTTCGTTTCCTCATCATCAACAACAACAACAACAGGGGTATGATGATGACAGCAGGATGATGAGGGGTTTTGATCATCAAAATTTTCCTGTTCAGCAATTTGATTATGGCTTTAACCCTATTCATGAGGCCTCATCGATGACCATGCCTGTGGGGAACGAACAGTTGATGATGAACCCTACTGCTATGCTGGAAGATGCTGTTCAGTATCAACAATTTCTCAATGCCTTCGCGGCCAGAATGCAGAATGCTTAA 1149 0.5231 MEEAFRRLNGMPLIQEPDPIQDSTIADHQKKANNKRMAKDGGGGSAAGPMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGAKARTNFVYPDSPPHPHPHHHHHNFRHSELFQAFNFPKQQCHVSKLVQSGRHGLTAPLSTQQQHRNVANNSHHSLNMLLFREFLNSNPCLVSSSSAAAAGGVGSSGANNSPYQYCMKEGGSACCFNGNCCGGGSNNGTTEVIAEGVEEEDQSLLELFPRESSDSGLLEEIVQRFLPKSKTVPNKNCDSTLKLKPEAAAVSFPHHQQQQQQGYDDDSRMMRGFDHQNFPVQQFDYGFNPIHEASSMTMPVGNEQLMMNPTAMLEDAVQYQQFLNAFAARMQNA* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3377 382 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 382 - -
Ahy3g3377 382 MobiDBLite consensus disorder prediction 1 51 - -
Ahy3g3377 382 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Ahy3g3377 382 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Ahy3g3377 382 MobiDBLite consensus disorder prediction 23 37 - -
Ahy3g3377 382 SUPERFAMILY DNA-binding domain 51 108 IPR016177 GO:0003677
Ahy3g3377 382 CDD AP2 51 107 IPR001471 GO:0003700|GO:0006355
Ahy3g3377 382 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Ahy3g3377 382 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Ahy3g3377 382 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Ahy3g3377 382 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 382 - -
Ahy3g3377 382 Pfam AP2 domain 51 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3377 Ahy-Chr3 132467404 132468864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3377 1 279 AP2-EREBP Transcription Factor Family AT1G12980 36.364 1.45e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy3g3377 AP2 5.30E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3377 - - ahf:112736058 671.003