Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3354 ATGCAAGAATTTAGGGGTAAGTTGCAGAAGGTGATAAAGAAAGCGAATCCAGATATAGATTGGGGGGTTTTCAATAACTACAACAACTACTACTACAACAACAGAAAGGAGGAATCTAAATCAGGCTCCGATGAATTGCCATCGCCTCGGGGGATGTTCGAAGCTATGTCGACTGCTGACTCCGACTACAGCTCCCGCGGGAGCAGCAGCAACTACAGCAGCCTACATTCCCCGGGGAATCGCCCTCCCTCGCCGCCGGGTCCGGGTTTGCCAAAGGCGAACTCGACGAAGGGGGACGTGAACGGGCAGCAGCAGTGGAAGGTAATGATTGACGTGCTGAGGTTCAAGAACGTTAGAAGGTTCTCGAACATCCCCTTGTTAGCCGCTAGCTACGAGATCTCTAGGAAGAACCTAAGGAAGAAGGTGGCTCGCAAGAGAGACGGCGAAGACGATGACGATCTTCCCATTGATCTCGATAGCATCCCAACGAAGCCTTCTTGGCGAAATTTCCCTTACGCTGATCTCGCTGCTGCCACCGATAATTTCTCCCCTGAGAACATGCTTGGAAAAGGTGGTCATGCTGAAGTCTATAGAGGATGTTTACCGGACGGTCAAATTGTAGCAGTGAAGAGGCTGATGATGAATGATGAGAAGGAAATTGAGGACCAAGTTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCACATAAACCACCCAAATGCAGCACTCCTTCTGGGATTTGGCATTGAGAAGGGCCTCTACTTTGTCCTCCAATACGCTCCTCGTGGCAGCCTCTCTTCTTTACTCTTTGGTTCTCAAGGCTTGGAGTGGAAGGCAAGGTTCAAGGTAGCTTTGGGGGTCGCCAAAGGATTGAAGTACCTCCATCATGATTGTCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCGACAATAACTATGAAGCTGAGATTTCGGATTTCGGATTGGCAAAGTGGCTTCCAGACCAGTGGGAACATCATGTTGTGTTCCCCATTGAAGGCACATTCGGGTATTTGGCTCCAGAATACTTTATGCATGGACTTGTGGATGAGAAGACTGATGTATTTGCATTCGGGGTTTTGTTATTGGAACTCATAACTGGGCGTCGCGCAGTCGATTCAAACAGCAGGGAGAGTCTTGTGATCTGGGCAAAACCACTGTTGGATGCAAAGCAGATTAAGGAAATAGTGGACCCAAGATTAGGAGATCAGTACGATCTTATTGAAATGAAGAATGCTATGACAACGGCTTCCCTATGTGTCCACCACAAGCCCTCCATGCGGCCATACATGAACAAGGTTGTGAAGCTGCTCAAGGGCGAAGAGGTAGCAGTTGAGATCACTCAAAAAACAAAATCCCCAAGATCATTATTGTTAGATGCATGTGATCTTGAAGACTATACTTGCTCTAATTACTTAAATGATCTTAATCGCCACAAGCAATTAATAATGGAGTGA 1494 0.4692 MQEFRGKLQKVIKKANPDIDWGVFNNYNNYYYNNRKEESKSGSDELPSPRGMFEAMSTADSDYSSRGSSSNYSSLHSPGNRPPSPPGPGLPKANSTKGDVNGQQQWKVMIDVLRFKNVRRFSNIPLLAASYEISRKNLRKKVARKRDGEDDDDLPIDLDSIPTKPSWRNFPYADLAAATDNFSPENMLGKGGHAEVYRGCLPDGQIVAVKRLMMNDEKEIEDQVGDFLSELGIIAHINHPNAALLLGFGIEKGLYFVLQYAPRGSLSSLLFGSQGLEWKARFKVALGVAKGLKYLHHDCPRRIIHRDIKASNILLDNNYEAEISDFGLAKWLPDQWEHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDAKQIKEIVDPRLGDQYDLIEMKNAMTTASLCVHHKPSMRPYMNKVVKLLKGEEVAVEITQKTKSPRSLLLDACDLEDYTCSNYLNDLNRHKQLIME* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3354 497 ProSiteProfiles Protein kinase domain profile. 182 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3354 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Ahy3g3354 497 MobiDBLite consensus disorder prediction 34 102 - -
Ahy3g3354 497 Gene3D Phosphorylase Kinase; domain 1 157 260 - -
Ahy3g3354 497 Pfam Protein kinase domain 185 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3354 497 SUPERFAMILY Protein kinase-like (PK-like) 162 450 IPR011009 -
Ahy3g3354 497 Gene3D Transferase(Phosphotransferase) domain 1 262 469 - -
Ahy3g3354 497 SMART serkin_6 182 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3354 497 MobiDBLite consensus disorder prediction 58 78 - -
Ahy3g3354 497 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 32 497 - -
Ahy3g3354 497 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Ahy3g3354 497 PANTHER OS08G0249100 PROTEIN 32 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3354 Ahy-Chr3 132163725 132166564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3354 144 473 Trihelix Transcription Factor Family AT5G38560 41.056 7.85e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy3g3354 Pkinase 4.70E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3354 - - adu:107480901 928.702