Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3340 ATGTCCCAAGAAGGTTTAACAGAAGCCTATGGATGGGCTGCAAGAGATTCATCGGGAATTCTCTCCCCTTTACATTTCACCAGACGGGCAAATGGTGATACAGATATCACCATCAAGATACTCTACTGCGGGATTTGCCACTCCGATTTTCATATGCTGAAGAATGATCATGGCATAAGCATCTATCCCTTAGTCCCCGGGCATGAGATTGTGGGGGAAGTGACAAAGGTGGGAAGACGAGTTACAAAATTCAAGGTTGGTGACGTGGCTGGAGTGGGTGGCATCGTGGGCACGTGCGGCACGTGTTCCAACTGCACACAGGGCTTGGAAACTTACTGCCCCAAAATGATTCTAACCTCTAGCTCACACTACCATGATGGATCAATAACGTATGGAGGCTTCTCTGATAATTTTGTTGTTGATGAGCACTTTGCCGTCACAATTCCCGAATCTATGCCTCTGCATGCCACAGCCCCTTTGTTGTGTGCTGGAATCACTGTTTACAGCCCCATGTTGCACCACGGGCTCTGCAGGCCCGGTCAGCACTTGGGTGTGGTGGGCCTTGGTGGGCTCGGCCATCTGGCTGTTAAGTTTGCCAAGGCTTTTGGTATGAAGGTCACTGTTATAAGCACTTCGTCCCGAAAGAAGGAGGAAGCAATTGAACGTCTTGGTGTGGATTCCTTCTTGCTTAGTCATCAGCAACAACAATTGCAGGATGCGACCGGGACAATGGATGGGATCATTGACACAGTTTCAGCACCTCATTCTGTGTATCCTTTAGTTGGTTTATTGAAGACAGGAGGCAATTTGATATTGGTGGGTGCACCTGCAGCCTCATCTCCTGAATTACCGTCTCTGCCACTCATTATGGGGAGGAAGTCAATAAGTGGGAGTGCAGGTGGAGGAATGAGAGAGACACAAGAGATGATTGAATTTGCGGCAAAGCACAATATTAGTGCAGATGTGGAAGTTATTCCCATGGATTATGTGACCACTGCTATGGGTAGACTTGTCAACAATGATGTTCAATATCGATTCGTCATTGATGTAGCAAATACTTTGGACACTCCACGCACTAACTAA 1083 0.4746 MSQEGLTEAYGWAARDSSGILSPLHFTRRANGDTDITIKILYCGICHSDFHMLKNDHGISIYPLVPGHEIVGEVTKVGRRVTKFKVGDVAGVGGIVGTCGTCSNCTQGLETYCPKMILTSSSHYHDGSITYGGFSDNFVVDEHFAVTIPESMPLHATAPLLCAGITVYSPMLHHGLCRPGQHLGVVGLGGLGHLAVKFAKAFGMKVTVISTSSRKKEEAIERLGVDSFLLSHQQQQLQDATGTMDGIIDTVSAPHSVYPLVGLLKTGGNLILVGAPAASSPELPSLPLIMGRKSISGSAGGGMRETQEMIEFAAKHNISADVEVIPMDYVTTAMGRLVNNDVQYRFVIDVANTLDTPRTN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3340 360 CDD CAD1 11 349 - -
Ahy3g3340 360 Gene3D - 163 320 - -
Ahy3g3340 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Ahy3g3340 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 152 318 IPR036291 -
Ahy3g3340 360 Pfam Alcohol dehydrogenase GroES-like domain 34 147 IPR013154 -
Ahy3g3340 360 SUPERFAMILY GroES-like 17 181 IPR011032 -
Ahy3g3340 360 PANTHER ALDEHYDE REDUCTASE 8 355 - -
Ahy3g3340 360 Pfam Zinc-binding dehydrogenase 190 314 IPR013149 -
Ahy3g3340 360 Gene3D - 12 350 - -
Ahy3g3340 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 8 355 - -
Ahy3g3340 360 SMART PKS_ER_names_mod 19 348 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3340 Ahy-Chr3 131905550 131907247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3340 8 360 Monolignol Biosynthesis Gene Families AT4G37990 62.890 1.40e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3340 - K23232 aip:107621738 682.174