Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3323 ATGGAGCTATCTCAACTTGGTTTCCTTGAGGAACTTATGCTTGCTCCAAGAAAAGACACATGGAGTAGTTGTACTAGTAATGATGTCTTCTCACCTTCTTCTTGGAACTACTTTGACCCTTTTCTTGATACCCCTTCTTCTTCTTCCTTTCCTCCTTCTGCATTCTCACCCCCACCACCAGACTGCCCATTCACCACCTCATACCCTTTTCCCGATGATGCCTTCACAATGCCTGACCTTGACTCTTCCTACACCACCAAGTATGAATATGAATATGATGATGCACCACCACCCCCACTCCCACATAACCATCAAGATCTTGATGACGATAATAATAACCCTTCAGTGCTGGACGATGAAGATGCTGGATTTCTTGGCTGCAAGGTTGAGGAACAAGCTGTCGTGGATGTTCAGGTTCATGTTCCTGTGGTCTTCAACATGGGCATGTGTGGGATAGGGGAGAAAAAGAACAAGTCCAAGAAGCTTGAAGGCCAGCCATCAAAGAATCTTATGGCTGAAAGAAGGAGAAGGAAGCGCCTCAATGACCGTCTCTCTATGCTAAGATCAATTGTCCCCAAGATCAGCAAGATGGACAGAACTTCCATTCTTGGAGATACCATAGACTACATGAAAGAGCTTCTGGAGAGGATTAACAAGTTGCAAGAGGAAGAAGTGGAGGAGGGCACAAGTCAGCAAAATCTCTTGGGGGTTTCTAAGGAACTCAAGCCAAATGAAGCGATGGTTAGAAATTCACCCAAGTTCGATGTTGAGAGGAGAGACAAGGACACCAGGATCAGCATCTGTTGTGCCACGAAGCCAGGATTATTATTGTCAACAGTGAATACATTGGAAGCATTAGGCCTTGAGATTCAGCAATGTGTCATAAGTAGCTTCAATGATTTCTCAATGCAAGCATCTTGCTCAGAGGTATCTGAGCAGAGAAATTGTGTTGACCCTGAAGAGATAAAGCAAGCACTATTCAGAAATGCAGGCTATGGTGGGAGATGCCTCTAG 1014 0.4487 MELSQLGFLEELMLAPRKDTWSSCTSNDVFSPSSWNYFDPFLDTPSSSSFPPSAFSPPPPDCPFTTSYPFPDDAFTMPDLDSSYTTKYEYEYDDAPPPPLPHNHQDLDDDNNNPSVLDDEDAGFLGCKVEEQAVVDVQVHVPVVFNMGMCGIGEKKNKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERINKLQEEEVEEGTSQQNLLGVSKELKPNEAMVRNSPKFDVERRDKDTRISICCATKPGLLLSTVNTLEALGLEIQQCVISSFNDFSMQASCSEVSEQRNCVDPEEIKQALFRNAGYGGRCL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3323 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 226 IPR036638 GO:0046983
Ahy3g3323 337 MobiDBLite consensus disorder prediction 89 114 - -
Ahy3g3323 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Ahy3g3323 337 Gene3D - 153 214 IPR036638 GO:0046983
Ahy3g3323 337 PANTHER TRANSCRIPTION FACTOR BHLH61-RELATED 2 337 - -
Ahy3g3323 337 CDD ACT_UUR-ACR-like 263 304 - -
Ahy3g3323 337 Coils Coil 203 223 - -
Ahy3g3323 337 Pfam Helix-loop-helix DNA-binding domain 170 213 IPR011598 GO:0046983
Ahy3g3323 337 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 337 - -
Ahy3g3323 337 SMART finulus 170 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3323 Ahy-Chr3 131756488 131758507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3323 28 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 50.148 1.04e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g3323 HLH 7.20E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3323 - - gmx:100806571 400.208