Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3290 ATGGCACCAGTTTCATTGCCTCCTGGTTTTAGGTTCCACCCTACAGACGAAGAACTGGTTGCTTATTACCTTAAAAGGAAGATCAATGGCCGTAAAATTGATCTCGAGATCATTCCTGAAGTTGATCTATACAAGTGCGAACCGTGGGACTTGCCAGGGAGGTCGTTGTTGCCGGGTAAGGATTTGGAGTGGTACTTCTTTAGCCCTCGGGACAGGAAGTATCCAAATGGGTCAAGAACCAACAGAGCAACGAAATGCGGGTACTGGAAGGCCACTGGAAAGGACAGGAAGGTAAATTCGCAGAGCCGCGCCGTAGGGATGAAGAAAACCCTTGTGTACTACCGAGGCAGGGCGCCTCACGGGTCTCGCACTGGTTGGGTCATGCACGAGTACCGTCTTCATGAGAGGGAATGCGAAACCAATGCTGCTTCTGGCTTGCAGGATGCCTATGCTCTTTGCCGTGTCTTCAAGAAGGCGGCGGTCATAATCCCCAAAGTGGCAGATCACTATGCTGGTAACAATATCATGATGATGACAACTGATTCTCAAGGAACACCCCAAGTCTTTGACACCATGCCTTGGGATCATCATATTGGGCATAATGGTAAATGCCCACACTTATCTCAGGATCCATTCCTCAATAACCTTCCATCTTCATCGTCCTCCTCATTTCCTCATTATGGAGCCCTAACTTACTCTCCATCTAAGATGGATGTAGCACTAGAGTGTGCAAGGATGCAGCACAGTTTTTCCATGCCTCCATTGGAGGTAGTGGAGGAATTCCCTAATGTGGGAATTTCAGAGCTCAACATTATGACACGTGGCACCACTTCAATGTGTGGAGGAAGCATGAACAATAACAATGAATCGGATATCTTGCAACAGATTCTTTCACTTGCTAATGCTAATGTTTCTTCCCATGAATTCACAAATCAATCAAACCATTCACACACATTATTGGGTGGCAACAATGCAAATTATTCTGCTCCTCATCATCACGAACATGATTTTGCTTTTAATGCTGGCACAAGTTACACTAATCACGCCGTAAATGATATGAACCCCATGAGATATGAAATCCAACATCAAAACCTAAGAACAATAGAGATTGGAGATCTTGAAAGCGAGTTCAAGAGCTTTATGGAAGAGCAAAAGACGGTTCCGATTGAGGATATATCAAGCTTCCAAACAAACATACAAGAAAATGAGGTTCAAGAATCTGAGCTACACAATAGCAACAAAGAATTTAGTGAAGCTGACATTGACAATTTCTCAATGGGGTTCATCAACGATGGTGACCCAAATGAGAACTTCATCGATGATGATGACAACATTGATTATTCAAATTCCACAAGCTTTGAGGTCCTTGAAGAAACCAAGGTTAGCCATGGAATGTTTGTGGCGACTCGCCGAGTAGCCGACACATTCTTTCATCAGATTGTTCCTTCACAAACCATCAAAGTTCAACTGAATCCAGTAACAATAATGGGCAACAATTCTTCCATGGAGATGCTCAAGAATAATCAAGAGTCTTTGTTCAAGAAGCTGATGATGATGAAGTCACCAAATACATTACCAAGTGCTATTGTATTTATCTTTGCACTATTGTTGACGCTTTGTGTTAATTTGAAGGGGCAAGTTGAAAATTATTGGGCATCAAGAAGTGATGATGATACGATTAATGTGAAGAAGAAATGTTGCTATGGTGCTAATAGAAGCATGAAGAGAATGAAACAAGTAGCTCACAAGATCATATGGAACCAGCAAGAAAAATCTTGGTGTGTTGGAATTAAAAGTGGGAGAGGATTTAGTGTGGTGTTGAAGAAAATTGGTATTTTCCTCTCCATTCTTTGGCTCTTTGTACCATGTGGGTTAACCATGTTACAATTAGTCCTTAATTGA 1902 0.4227 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIDLEIIPEVDLYKCEPWDLPGRSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKCGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLHERECETNAASGLQDAYALCRVFKKAAVIIPKVADHYAGNNIMMMTTDSQGTPQVFDTMPWDHHIGHNGKCPHLSQDPFLNNLPSSSSSSFPHYGALTYSPSKMDVALECARMQHSFSMPPLEVVEEFPNVGISELNIMTRGTTSMCGGSMNNNNESDILQQILSLANANVSSHEFTNQSNHSHTLLGGNNANYSAPHHHEHDFAFNAGTSYTNHAVNDMNPMRYEIQHQNLRTIEIGDLESEFKSFMEEQKTVPIEDISSFQTNIQENEVQESELHNSNKEFSEADIDNFSMGFINDGDPNENFIDDDDNIDYSNSTSFEVLEETKVSHGMFVATRRVADTFFHQIVPSQTIKVQLNPVTIMGNNSSMEMLKNNQESLFKKLMMMKSPNTLPSAIVFIFALLLTLCVNLKGQVENYWASRSDDDTINVKKKCCYGANRSMKRMKQVAHKIIWNQQEKSWCVGIKSGRGFSVVLKKIGIFLSILWLFVPCGLTMLQLVLN* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3290 633 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 207 341 - -
Ahy3g3290 633 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 171 - -
Ahy3g3290 633 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 207 341 - -
Ahy3g3290 633 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 171 - -
Ahy3g3290 633 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Ahy3g3290 633 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Ahy3g3290 633 ProSiteProfiles NAC domain profile. 6 158 IPR003441 GO:0003677|GO:0006355
Ahy3g3290 633 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3290 Ahy-Chr3 131299050 131302870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3290 1 541 NAC Transcription Factor Family AT1G65910 43.993 1.30e-137 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g3290 NAM 2.80E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3290 - - ahf:112791681 1259.2