Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3286 ATGGTTCTGTCGAAGACGGCATCTGAGAGCGACGTCTCGGTTCACTCAACGTTTGCGTCACGCTATGTGAGGACCTCACTTCCCAGGTTCAAGATGCCGGAGGAGTCGATCCCCAAGGAGGCAGCGTACCAGATAATAAACGACGAGCTGATGTTAGACGGAAATCCCAGGCTGAACCTGGCGTCGTTTGTGACGACTTGGATGGAGCCGGAGTGCGACAAACTCATAATGGCCGCCATTAACAAGAACTACGTTGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGAATCGGTGTGTAAACATGATAGCTCATCTATTCAATGCGCCACTTGGAGATTCAGAAACTGCCGTTGGCGTTGGGACGGTTGGATCATCGGAGGCCATAATGCTGGCTGGATTGGCATTCAAAAGAAAATGGCAGAACAAAAGGAAAGAAGAAGGTAAGCCTTACGACAAGCCCAACATTGTGACCGGTGCCAATGTCCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTTGAGGTGGAGTTGAAGGAGGTGAAGCTCCGTGATGGATACTATGTTATGGACCCTGAAAAGGCTGTGGACTTGGTTGATGAGAACACCATTTGCGTTGCTGCTATTCTTGGTTCCACCCTCAACGGTGAGTTTGAAGATGTGAAGCGCTTAAATGATCTTCTCATTCAAAAGAATAATCAAACCGGCTGGGATACTCCTATTCATGTTGATGCTGCCAGTGGTGGATTCATTGCTCCGTTTCTATATCCCGAGCTTGAGTGGGACTTCCGGTTACCGCTGGTCAAGAGTATCAATGTCAGCGGCCACAAGTACGGTCTAGTTTACGCCGGAATTGGTTGGGTTATCTGGAGAAGCAAGGATGACCTGCCTGAGGAACTCATCTTCCACATCAACTATCTCGGAGCTGATCAACCCACTTTCACTCTTAACTTCTCCAAAGGTTCCAGTCAAGTCATTGCTCAATACTACCAACTAATTCGCCTTGGTTATGAGGGATATAAAAATGTGATGGAAAATTGTAGGGACAACATGTTAGTGCTCAAGGATGGACTTGAGAAAACAGGGCGCTTTGACATTGTTTCCAAGGACGATGGTGTTCCTTTGGTGGCCTTCACACTCAAAGACAACAGCCGCTTCAATGAATTCCAAGTCTCTGACTTGCTCAGGCGCTTTGGCTGGATAGTGCCGGCATACACCATGCCCCCGGATGCACAGCATGTTACCGTTCTCCGCGTGGTCATCCGGGAGGACTTCTCCAGGACCCTCGCAGAGCGCCTTGTGGCTGATGTGGAGAAGGTGCTTCACGAGCTTGATATGCTTCCCCCCAAGGTGGTTGTGGTTAATGGAGAAGAGGCAGCAACAAGCGCTAATGGCAAGGTTAAGAAGACTGCTCTGGAGACACAGAGGGAGATCACTGCAGTTTGGAAGAAGTTTGTACTGGAAAGGAAGAAGCTGAATGACAAGATGAATGGGGTTTGTTGA 1503 0.4897 MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKEEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVDLVDENTICVAAILGSTLNGEFEDVKRLNDLLIQKNNQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKDDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMLVLKDGLEKTGRFDIVSKDDGVPLVAFTLKDNSRFNEFQVSDLLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVADVEKVLHELDMLPPKVVVVNGEEAATSANGKVKKTALETQREITAVWKKFVLERKKLNDKMNGVC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3286 500 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Ahy3g3286 500 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Ahy3g3286 500 CDD DOPA_deC_like 59 439 - -
Ahy3g3286 500 Gene3D - 1 65 - -
Ahy3g3286 500 Gene3D - 66 360 IPR015421 GO:0003824
Ahy3g3286 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 - -
Ahy3g3286 500 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy3g3286 500 Gene3D - 361 448 - -
Ahy3g3286 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3286 Ahy-Chr3 131253382 131258424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3286 1 500 Calmodulin-binding Proteins AT5G17330 83.004 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3286 K01580 - gmx:100796533 926.006