Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy3g3241 | ATGGAGCACATGATGGGTCTGCTGAGAATTCATGTCCAAAAAGGGGTTAACCTTGCTGTAAGGGATGTACTAAGCAGTGACCCTTATATCATCATCAGAATGGGCAAGCAGAAGGTGAAGACTAAGGTGGTGAAGAAGAGTATCAACCCTGAATGGAATGATGATTTGACTTTGTCTATTTCAGATCCTAGTCTCCCAGTACAGCTATTTGTGCATGACAAGGACACATTCAGCCTTGATGACAAAATGGGGGATGCTGAGTTTGATATCAGTCCGTTTGTGGAAGCGGTGAAGATGCGGCCTCAAGGCGTCCCGAATGACACCATAGTCAAAAGGGTGCAGCCTAGCAGACAGAACTGTTTGGCAGAGGAGAGCCACATTGTGTGGAGAGATGGCAAAGTGGTTCAGAACATGGTTCTTAGGCTAAGAAATGTGGAGTCTGGTGAAGTGGAGCTACAACTCCATTGGATTGACATTCCTGGTGCCAAGGCTCTTTGA | 498 | 0.4639 | MEHMMGLLRIHVQKGVNLAVRDVLSSDPYIIIRMGKQKVKTKVVKKSINPEWNDDLTLSISDPSLPVQLFVHDKDTFSLDDKMGDAEFDISPFVEAVKMRPQGVPNDTIVKRVQPSRQNCLAEESHIVWRDGKVVQNMVLRLRNVESGEVELQLHWIDIPGAKAL* | 166 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy3g3241 | 165 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Ahy3g3241 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE | 1 | 163 | - | - | |
| Ahy3g3241 | 165 | Gene3D | C2 domain | 2 | 164 | IPR035892 | - | |
| Ahy3g3241 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 157 | IPR035892 | - | |
| Ahy3g3241 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Ahy3g3241 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 104 | IPR000008 | - | |
| Ahy3g3241 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy3g3241 | Ahy-Chr3 | 130489099 | 130491138 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy3g3241 | 38 | 165 | C2H2 Transcription Factor Family | AT1G70790 | 56.923 | 1.25e-49 | 155 |