Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3232 ATGGCACTGGCCAGAGACCAAATTCCTCATGATTCAAGCATGGGAAGCAAGGTTCAAAGTTGTGTTTTCAATGAAAATAATGAGTACCACAAATCAGTGCTAGAAGAGGAAGATGGCTCACAAAGCACCAATGGGTTCAGCAATGATTCAGCTATAACCCATTCTCCTCCTCTATGTGGCAATGCCTATGCTTATAAGGCCACAAACTATCAACTTGAGGAGGAACAACAATCTCTGATTGATTTCAAAGGTAGTTGCTACAACACTTTAACACAAGTAGCTAGTGAATCTTTGCTTAACTTTGAGCAGAACAGAATGGTCCCTGGCAACAGCTACATGAAAGATGACACTAATGTTTGGGACAACAATCTGCATCATCAATGGAGTCAGATTAGTCCAAGAAGCACTTCAGAGCTGCGACCGGTGCAGGATTCAAGTTGCTTCCAGTCTTCTAGTAGTAGCTACAGCACCATAGTCAACAGTGCAAAAGAGAAGCAATTACATGGTGAGAGTTCATCATATGGTTGGTTCTATTCTCAACAAACTATACCTGCTCATAGCATCCAGGACCCTGCAGTTCAAGAACCAATATCCAAAAAGCGCATTTCAATGCAGGCTGAGAAAATGAAAGCTGCCAAGAAGCAATGCACAGATGAGAGTAAAATGCCAAAATCCAACAAGTTAGGAGCATCCAAGGATCCTCAAAGTGTTGCTGCTAAGAATAGAAGAGAGAGGATAAGTGAGCGGCTCAAGATACTACAAGAACTAGTTCCCAATGGCTCCAAAGTTGATTTGGTTACAATGCTGGAGAAAGCAATTAGCTATGTGAAGTTTCTTCAGCTTCAAGTGAAGGTGTTGGCAGCTGATGAATTTTGGCCTGTTCAAGGTGGAAAAGCTCCTGATATCTCTCAAGTAAAAGAAGCCATTGATGCAATTCTTTCATCCCAAAGATCAGAGAAACAAGTTCAGCAACCTCAAAGTAGATGA 987 0.4174 MALARDQIPHDSSMGSKVQSCVFNENNEYHKSVLEEEDGSQSTNGFSNDSAITHSPPLCGNAYAYKATNYQLEEEQQSLIDFKGSCYNTLTQVASESLLNFEQNRMVPGNSYMKDDTNVWDNNLHHQWSQISPRSTSELRPVQDSSCFQSSSSSYSTIVNSAKEKQLHGESSSYGWFYSQQTIPAHSIQDPAVQEPISKKRISMQAEKMKAAKKQCTDESKMPKSNKLGASKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVKEAIDAILSSQRSEKQVQQPQSR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3232 328 Pfam Helix-loop-helix DNA-binding domain 240 280 IPR011598 GO:0046983
Ahy3g3232 328 MobiDBLite consensus disorder prediction 213 241 - -
Ahy3g3232 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 230 279 IPR011598 GO:0046983
Ahy3g3232 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 20 315 - -
Ahy3g3232 328 SMART finulus 236 285 IPR011598 GO:0046983
Ahy3g3232 328 CDD bHLH_AtIND_like 231 293 - -
Ahy3g3232 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 20 315 - -
Ahy3g3232 328 Gene3D - 223 287 IPR036638 GO:0046983
Ahy3g3232 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 288 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3232 Ahy-Chr3 130379937 130381637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3232 74 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 47.347 2.75e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g3232 HLH 1.40E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3232 - - gmx:100810010 383.259