Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3218 ATGGGGAACTGTTTTAGTGCCAGGATCAAAGCTGAGAGCCCTCCACGCAATGAAGAGAAGGATTTGAGTGGTATAAGCAGCAAGGTATCTTCTCGTTCCATGCTTATGTCTCCTCTGACAGAGGGCGAGATTCTGCTATCCACCAATTTAAAGAACTTCAGCTTCATTCAACTACGAACCGCCACAAGGAACTTTCGTCCGGATAGTGTGGTTGGTGAAGGTGGCTTTGGCTCTGTATTTAAGGGCTGGATCGACGAGCACACTCTTGAACCCACAAAACCCGGCACCGGACTCGTCATTGCCGTGAAGAGGCTAAATCAAGAGAGCACACAGGGACATACTGAATGGCTGACAGAAATCAACTACTTGGGTCAGCTGGATCATCCTAATCTTGTGAAACTCATAGGTTACAGCTTAGAAGATGATCACCGGATTTTGGTGTATGAGTTTTTGACTAAAGGCAGTTTAGATAACCATTTGTTTAGGAGAGCTTCTTATGTTCGGCCGCTTTCTTGGAACATACGCATGAATATAGCTCTTGATGCAGCTAAGGGCCTTGCATTTCTTCACAGCGACCAAGTAGATGTAATATACCGAGACTTGAAGACTTCTAACATCTTGCTTGATTCGAGCTATCATGCAAAACTGTCTGATTTTGGATTGGCAAAGGATGGACCAGTAGGTGACAAGAGCCATGTCTCTACCAGGATAATGGGAACATTTGGCTATGCTGCTCCTGAATACATAGCCACAGGTCATTTAACGAAGAAGAGTGATGTATACAGTTTTGGCGTTGTACTGCTGGAAATCATAGCAGGGAAACGCGCATTAGATAAGAACAGACCAACAGGGGAGCATAATTTGGTTGATTGGGCTAAGCCATTACTCGTCAGCAAAAGAAAAATCTCACAAGTCATGGATTCCCGTTTGGACAGTCAATATCCGTTGCGCGAAGCCATGAAAGTAGCAGTTCTTGCAATCAAATGCCTCTCTGCTGAGCCCAAATTCAGGCCTACCATGGATGAGGTTGTAAGATCCTTGGAGCAACTCAAGGATTCTGAAGACACAACAACAAGTGGAGTGGAAAAATCTCCAGATCAAACAGTTAAAACGAATGGTAATAGTGCAAGATCTAGTAGAATTAGTTCAAAACAACATAGAAGAAGTAACAATGAATCTTTAAATGGAGAAGGTAGTTCTAATAATCAGACACCATCAGCTTCTCCTCTTCACACTTAG 1239 0.435 MGNCFSARIKAESPPRNEEKDLSGISSKVSSRSMLMSPLTEGEILLSTNLKNFSFIQLRTATRNFRPDSVVGEGGFGSVFKGWIDEHTLEPTKPGTGLVIAVKRLNQESTQGHTEWLTEINYLGQLDHPNLVKLIGYSLEDDHRILVYEFLTKGSLDNHLFRRASYVRPLSWNIRMNIALDAAKGLAFLHSDQVDVIYRDLKTSNILLDSSYHAKLSDFGLAKDGPVGDKSHVSTRIMGTFGYAAPEYIATGHLTKKSDVYSFGVVLLEIIAGKRALDKNRPTGEHNLVDWAKPLLVSKRKISQVMDSRLDSQYPLREAMKVAVLAIKCLSAEPKFRPTMDEVVRSLEQLKDSEDTTTSGVEKSPDQTVKTNGNSARSSRISSKQHRRSNNESLNGEGSSNNQTPSASPLHT* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3218 412 SUPERFAMILY Protein kinase-like (PK-like) 37 347 IPR011009 -
Ahy3g3218 412 SMART serkin_6 65 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3218 412 MobiDBLite consensus disorder prediction 1 27 - -
Ahy3g3218 412 Pfam Protein tyrosine and serine/threonine kinase 69 347 IPR001245 GO:0004672|GO:0006468
Ahy3g3218 412 ProSiteProfiles Protein kinase domain profile. 65 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g3218 412 ProSitePatterns Protein kinases ATP-binding region signature. 71 103 IPR017441 GO:0005524
Ahy3g3218 412 CDD STKc_IRAK 71 350 - -
Ahy3g3218 412 MobiDBLite consensus disorder prediction 348 412 - -
Ahy3g3218 412 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
Ahy3g3218 412 PANTHER OS01G0588500 PROTEIN-RELATED 17 393 - -
Ahy3g3218 412 MobiDBLite consensus disorder prediction 360 380 - -
Ahy3g3218 412 Gene3D Transferase(Phosphotransferase) domain 1 151 376 - -
Ahy3g3218 412 PANTHER KINASE 1B 17 393 - -
Ahy3g3218 412 MobiDBLite consensus disorder prediction 392 412 - -
Ahy3g3218 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3218 Ahy-Chr3 130200414 130202399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3218 43 408 Glycoside Hydrolase AT3G07070 44.054 6.88e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy3g3218 PK_Tyr_Ser-Thr 2.60E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3218 - - gmx:100775335 573.548