Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3204 ATGAAAGGGTTTGGGTCTTCATGTGGAGCATGCAAGTACCTAAGGAGAAGGTGCACAAGAGATTGTGTATTTTCCCCTTACTTCTCCTATGATGAGGCATCAACCCATTTTGCGGCAGTTCATAAGGTGTTTGGTGCTAGCAACGTCTCTAGACTGTTGCTACACCTTCCGTTGCACAACAGAAGTGACGCTGCTATCACCATAACTTACCAAGCTCTCGCTCGCATGCACGATCCTATCTATGGTTGTGTTGCTTATATCTATGTATTGCAGCAACAGGTTGCAAGCTTGCAAAGGGAGATAGATGATATACTAGGAAATAATTTCATGATGAAGAATTCCTCATGTCTTGGTGTTGAGAATTATTGTGGTAGTGTTCATCAATCACCGATGATGAACATCAACAACGGAATAGAGTATATTGTGCAAGAAGGAACAAGGAGTCAATGTTATAAAAGTCAACTAGCTAATCAATTTTCTAGCGATGAAGAAATTGACAGAGAGTATGAAAGATTATTATTGATGGACACAGATCATTTATTATATGGTGAGACAGATCCCATCTCCCTGGAGAAGTTTCTGTCTGAAATTGACCAGGATGTGTTCCTTAATCATCCATGGTTCAAGCATAATAATAATAATGCTGACATTATTGGAAACTAG 663 0.3952 MKGFGSSCGACKYLRRRCTRDCVFSPYFSYDEASTHFAAVHKVFGASNVSRLLLHLPLHNRSDAAITITYQALARMHDPIYGCVAYIYVLQQQVASLQREIDDILGNNFMMKNSSCLGVENYCGSVHQSPMMNINNGIEYIVQEGTRSQCYKSQLANQFSSDEEIDREYERLLLMDTDHLLYGETDPISLEKFLSEIDQDVFLNHPWFKHNNNNADIIGN* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3204 220 Pfam Lateral organ boundaries (LOB) domain 7 102 IPR004883 -
Ahy3g3204 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 215 - -
Ahy3g3204 220 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Ahy3g3204 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3204 Ahy-Chr3 129845413 129846932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3204 1 176 AS2 family AT5G06080 51.955 8.59e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy3g3204 LOB 2.50E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3204 K13945 - gmx:100787638 226.483