Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3203 ATGGCGAATCGATGGTGGGCTGGGAATAATGTGGCTATGAGGGCAACCGACTCAATCTCAGCGTCCCCATCAGTGCACCTGAGAAGAGAACAGGAGTTCCTGGACACTCCCACCAACAACAACAACACTCCAACAAACAGCAGCAATAGTAACACCAACCCCAACACCGAAGAAGACGAGAGCAGAGACACCGGTGCCGCTGCTGGAGCAAGGGGAGACGACAACAACCCTGCAGACCCGGCAAGCGGACCAGGAAGCAGCGGAAAAAGGCCACGTGGCAGGCCTCCGGGATCTAAGAACAAGCCTAAACCCCCAGTTGTCATTACCAAAGAGAGCCCCAACGCACTCCGCAGCCATGTTCTTGAGATCAGCAGCGGCTCCGACGTCGCTGAGAGCATCGCCACCTTCGCCAACCGCCGCCATCGAGGTGTGTCGGTCCTCAGTGGAAGCGGCATTGTTGCAAACGTCACGCTCCGCCAACCCGCTGCTCCCGGTGGCGTCATCACTCTCCATGGAAGGTTCGAGATACTCTCACTCAACGGCGCTTTCCTGCCCGCTCCTTCTCCTCCCGGGGCCACCGGACTCACCGTTTACCTGTCCGGCGGTCAGGGGCAGGTGGTTGGCGGAACTGTTGTGGGTTCCTTGGTGGCTTCGGGCCCTGTAATGGTGATTGCCGCAACCTTTGCCAATGCTACTTATGAACGGTTACCGCTTGTGGAAGATGAACAAGTTGAAGAAGAAATGCAAGTGCAGCAGCAACATTCAGGAGGAGTGAGTGGTGGCGGTGGCGGTGCTGCTGCTGGTGGTGGCAGTGGAGGAGGTTCTTCTTCTCAAGGGGGTGGTTTGGGTGAGGGTGGTGGTTCTGTGGGGATGTACAATTTGCCACCGAATTTGATGCACAATGGTCAATTGGCGGCACATGATGTTTTCTGGGGACCTCCACCGCCTCGTCCTCCGCAGCCTCCATCTTTCTAA 975 0.5723 MANRWWAGNNVAMRATDSISASPSVHLRREQEFLDTPTNNNNTPTNSSNSNTNPNTEEDESRDTGAAAGARGDDNNPADPASGPGSSGKRPRGRPPGSKNKPKPPVVITKESPNALRSHVLEISSGSDVAESIATFANRRHRGVSVLSGSGIVANVTLRQPAAPGGVITLHGRFEILSLNGAFLPAPSPPGATGLTVYLSGGQGQVVGGTVVGSLVASGPVMVIAATFANATYERLPLVEDEQVEEEMQVQQQHSGGVSGGGGGAAAGGGSGGGSSSQGGGLGEGGGSVGMYNLPPNLMHNGQLAAHDVFWGPPPPRPPQPPSF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3203 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 319 - -
Ahy3g3203 324 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 319 IPR014476 GO:0003680
Ahy3g3203 324 MobiDBLite consensus disorder prediction 34 55 - -
Ahy3g3203 324 CDD DUF296 117 200 IPR005175 -
Ahy3g3203 324 PIRSF ESCAROLA 28 324 IPR014476 GO:0003680
Ahy3g3203 324 Gene3D - 116 256 - -
Ahy3g3203 324 MobiDBLite consensus disorder prediction 243 297 - -
Ahy3g3203 324 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 238 - -
Ahy3g3203 324 MobiDBLite consensus disorder prediction 305 324 - -
Ahy3g3203 324 MobiDBLite consensus disorder prediction 1 113 - -
Ahy3g3203 324 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 229 IPR005175 -
Ahy3g3203 324 ProSiteProfiles PPC domain profile profile. 113 252 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3203 Ahy-Chr3 129819576 129821330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3203 1 324 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.143 2.38e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3203 - - qsu:112039774 304.679