Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3201 ATGGAGGAAACACATCGTGATGGTCGTGATCAGGACCAGTACTTGATGTGGATGAAGAGAAAACAAATCTTGAAGTCACATATTCAAGTCGCACCCTTTGGAATAAGTGGCAATAATTCATCATCATCATCATGGGAAGAAAAGGCATTTGCTGAAGATGCAGCAAGGATTCTAGGTGGATGCATATGGCCGCCAAGATCATACTCATGCAGCTTCTGCAAAAGAGAGTTCAGGTCTGCTCAAGCTCTTGGGGGACACATGAATGTTCATAGGAGGGACAGAGCTAGGCTCAAACGAAGCCTTAGCCCTCATAATCATCATCATCATCATGGTAAAAATGATTGTAAGTCATCATTATTATTAGGTACTTCTCATCATCACCATCATCAATCTTCTGGTGAGAATTACTATCACTACTACTCTAGTAGCTTTACTGGAACTACTGATAATAATTATAAAGCTATGAGTAGCAGCAAACCTTCATCATCTGATTCAGAACCAAAAGAAGGAAAAGTCAATGCAATAACAAGTAGTTATTGTAATGATGGTGATTATGTTGAAACAAGTTTGTGTGTGGGGCTGAATAATAATTCATCGTCATCATTATGTGGGAACGAAGAATCTTATTGTAAAAGGTCAAAGAGGACAAATTCTTCAATGTTTTCTTCATTTCTGAAGCCATGTTCAAATGATAGAAGGCTGCAGGTGGCTTTATTGCAATCTGCAGAATCATTTGCAGAACCTACTGAAACTGAAATGGAAGATTTGGATCTTGAACTCAGGCTGGGTAAACCGCAGAAAATTTAG 807 0.3879 MEETHRDGRDQDQYLMWMKRKQILKSHIQVAPFGISGNNSSSSSWEEKAFAEDAARILGGCIWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKRSLSPHNHHHHHGKNDCKSSLLLGTSHHHHHQSSGENYYHYYSSSFTGTTDNNYKAMSSSKPSSSDSEPKEGKVNAITSSYCNDGDYVETSLCVGLNNNSSSSLCGNEESYCKRSKRTNSSMFSSFLKPCSNDRRLQVALLQSAESFAEPTETEMEDLDLELRLGKPQKI* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3201 268 Pfam C2H2-type zinc finger 68 92 - -
Ahy3g3201 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Ahy3g3201 268 PANTHER OS07G0101800 PROTEIN 11 267 - -
Ahy3g3201 268 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 267 - -
Ahy3g3201 268 SMART c2h2final6 68 90 IPR013087 -
Ahy3g3201 268 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Ahy3g3201 268 SUPERFAMILY beta-beta-alpha zinc fingers 65 95 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3201 Ahy-Chr3 129800357 129801163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3201 33 100 C2H2 Transcription Factor Family AT2G37740 69.118 7.31e-27 104