Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3162 ATGGTTTACTCCTTTTATAACTCCAATGATTTTTCTTCCCCCGGCTACGATGTTTCGAGGTTGATTAGTCCTTCTTTGCATGACTATGGAGCTTCCTATGGTGTTTTGGAACCATCACATGCATTGATTTTGGAGAGTGAAAAGATAGAGCAAGTGAATAATGGATCAGAAGATGCAAGGGTAGGAAAGAATTATGAGAACTCTGATGCAAAAGCCTTAGCGGCTTTGAAGAATCACAGTGAAGCTGAGAGGAGGAGGAGGGAGAGAATCAATGGTCATCTTGCAACTCTACGAGGTCTTGTTTCCTCCACTGACAAGATGGACAAAGCAACAATATTAGCAAAAGTCGTTAGCCAAGTGAAGGAATTGCAGAGGAATGCAATGGAAGCAAGTAAAGGTCTTCTAATCCCAACAGATTTTGATGAAGTTGAAGTTGAACCATATGAAGATCATAGATCCATGTCATACAAGGCATCCATCTGCTGCGATTACCGGCCGGAGATTCTCTTCGACCTGCGACACACACTTGATGCCCTTGAACTGCAACTGGTGAGGGCAGAGACATCAACCTTAGAAGGAAGAATGAAAAATGTGTTTGTGTATAGATGTTGCAAAGGGAAAGGTGACAATAATAACACCGGGGCATGTCAAGCTCTTGCAAGAAATGTTCAAAAGGCACTGAGTCGTGTAATAGATAAGGCTTCTAATGCACTTGAGTACTCACTCAGAGCTTCACTTCCATGTAAGAGGAGAAGAATCTGCTTGCTCGAGAATTGA 777 0.4247 MVYSFYNSNDFSSPGYDVSRLISPSLHDYGASYGVLEPSHALILESEKIEQVNNGSEDARVGKNYENSDAKALAALKNHSEAERRRRERINGHLATLRGLVSSTDKMDKATILAKVVSQVKELQRNAMEASKGLLIPTDFDEVEVEPYEDHRSMSYKASICCDYRPEILFDLRHTLDALELQLVRAETSTLEGRMKNVFVYRCCKGKGDNNNTGACQALARNVQKALSRVIDKASNALEYSLRASLPCKRRRICLLEN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3162 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 126 IPR036638 GO:0046983
Ahy3g3162 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Ahy3g3162 258 PANTHER DNA BINDING PROTEIN-LIKE 36 257 - -
Ahy3g3162 258 Pfam Helix-loop-helix DNA-binding domain 78 124 IPR011598 GO:0046983
Ahy3g3162 258 Gene3D - 71 132 IPR036638 GO:0046983
Ahy3g3162 258 SMART finulus 80 129 IPR011598 GO:0046983
Ahy3g3162 258 CDD ACT_UUR-ACR-like 159 231 - -
Ahy3g3162 258 PANTHER TRANSCRIPTION FACTOR BHLH30 36 257 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3162 Ahy-Chr3 129226065 129230701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3162 15 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 33.040 1.75e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy3g3162 HLH 2.10E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3162 - - gmx:100818879 291.197