Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3137 ATGGCTTCTTCGAACAGACATTGGCCAAGCATGTTCAAATCGAAGCCTTGCAACCAGTTTCAGCATGACATGGTCTCAACTACTACTGCATCTTGCCACAGATCAGCTCCTTATAATCCTATTTCAGGATTAGGATGTGATGAGAAGAGTCCAGAACCGAAGCCAAGATGGAACCCAAAACCAGAACAAATCCGGATTCTGGAGGCGATATTCAATTCTGGAATGGTGAACCCTCCAAGGGATGAGATAAGGAAGATAAGGATGCAGTTACAGGAGTACGGTCAAGTGGGTGACGCCAACGTCTTCTACTGGTTCCAGAACCGCAAATCAAGGAGCAAGCACAAGCTTCGCCACCTCACTAATAATAATAGTAGGAATAACAACACTCCATCACCGTCACCACCGCCGCCGCTGCCGCCGCAGCAGCAATTCATCTCAGCCACTACCAACTCATCCTCCTCCTCTTCCTCTGACAAATCATCTCCAAAGTTCGTTCCCGCTTTCACCGATGTGGTGATGCTGCTGCCTAATTCTCCAACAGCCTCTGTGAACCAGAACTACTTTCATCACAACGACACCAATAATAACAACACTATCAATCATCTTTTGGTTCCTCCACCACTACCGATCGAACCATTCTTCCCTGTGTTCCATAATAGTAGTGGCGTGGTTGCAACTACTGAGATCTCTAATAGTGTGGGTAATCATCATCAACCTCCTCATCTTGTTTATCAAGAAAACGTTGATCCTTGCACTGATCTGCTCCTTAGCGAAATCATGAGCCATGGAGGAGTAGAACCGTCCTCTAAGAGATACCATGAACAAGACAAGGCAGCGGCCACCGTCAAGATTAGGCAGCCACAACAATACATCAGCTTCTGTCCGGTTTCAACTCCTCCTCCTTCCTTCACCAACACAACCGCTACACCAATTACTGTTCCATCCCCATTTCAAGGTGCAGGTGGTGGTTGTGGTAGTGGTGATGCGTCAGCGGCGAAATGTACGGTGTACATAAATGACATGGCATGCGAAGTCGATGTGGGTCCCTTTAACGTGCGTCACGCTTTTGGTGATGAGGCGGTGCTTATCGATTCCTCCGGCCACACCGTTCTCACCGATGACTGGGGCGTCACCCTCCACCCTCTCCAGCATGGCTTCTCTTACTATCTCATCTGA 1176 0.4838 MASSNRHWPSMFKSKPCNQFQHDMVSTTTASCHRSAPYNPISGLGCDEKSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRMQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLTNNNSRNNNTPSPSPPPPLPPQQQFISATTNSSSSSSSDKSSPKFVPAFTDVVMLLPNSPTASVNQNYFHHNDTNNNNTINHLLVPPPLPIEPFFPVFHNSSGVVATTEISNSVGNHHQPPHLVYQENVDPCTDLLLSEIMSHGGVEPSSKRYHEQDKAAATVKIRQPQQYISFCPVSTPPPSFTNTTATPITVPSPFQGAGGGCGSGDASAAKCTVYINDMACEVDVGPFNVRHAFGDEAVLIDSSGHTVLTDDWGVTLHPLQHGFSYYLI* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3137 391 SMART HOX_1 52 119 IPR001356 GO:0003677
Ahy3g3137 391 MobiDBLite consensus disorder prediction 143 162 - -
Ahy3g3137 391 CDD homeodomain 53 115 IPR001356 GO:0003677
Ahy3g3137 391 Pfam Homeodomain 54 114 IPR001356 GO:0003677
Ahy3g3137 391 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 391 IPR044557 GO:0003700|GO:0050793
Ahy3g3137 391 SUPERFAMILY Homeodomain-like 49 117 IPR009057 -
Ahy3g3137 391 Gene3D - 54 119 - -
Ahy3g3137 391 ProSiteProfiles 'Homeobox' domain profile. 50 115 IPR001356 GO:0003677
Ahy3g3137 391 MobiDBLite consensus disorder prediction 113 162 - -
Ahy3g3137 391 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3137 Ahy-Chr3 128876693 128879308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3137 1 123 Wox Gene Family AT2G33880 76.190 1.60e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy3g3137 Homeodomain 1.20E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3137 - - aip:107633725 701.049