Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3121 ATGGCGGGTTTGATTGATCTCAACACCACGGAGGACGATGAAACGCCGTCGTATGGTTCCTACGCTGCTTCTCCATCTTCTTCCTCCTCGCACTCGGGAACAAGCACTGCTTCTGTTTCAGCTTCAGCTCCGGTTGTTCCTGGTTCTTCTTCTAACTCCGTGTGTTTGGAGCTGTGGCACGCGTGTGCAGGTTCAATGATCTCGTTGCCGAAGAAGGGAACTCTTGTTGTGTACTTCCCACAGGGACACTCTGAGCAGCAACTTCACGATTTTCCTCTCTCTAACAACAATAACAGCATCCCACCCCATGTGTTCTGTCGCGTTCTCGATGTTAAGCTCCATGCAGAGGAAGGGAGTGATGAAGTGTATTGCCAGGTTTTGCTTGTTCCTGAAAATGAGGAAGGGGATATTGAGGCTGATGGTGAAGAGGAGGACACGGATGCTGTGATGAAGGCAACAACACCCCACATGTTTTGCAAGACTCTGACAGCTTCTGATACCAGCACTCATGGTGGATTCTCGGTTCCCCGTCGTGCAGCTGAAGATTGCTTTCCTCCACTGGATTATAGTCAACAGAGGCCATCACAAGAGCTTGTAGCAAAGGATCTGCATGGCCGGGAATGGAAGTTTCGACATATTTACAGGGGGCAGCCACGAAGGCATTTGCTTACCACCGGATGGAGTGCATTTGTGAACAAGAAGCAGCTGGTGTCTGGAGATGCTGTCCTGTTTCTTAGGGGGGCAGATGGTGAACTGAGATTGGGAATTCGTAGGGCAGGTCAATTGAAAAGTGATGGTAAATTTTCAGTTCTCCCTCACCAGCAGTTGAATCATAGCACTCCTGTGGAAGTGATTAATGCTCTGTCTTCAAGATGTGCCTTCAGTGTTCACTATAACCCAAGGGTTAGTTCATCAGACTTCATCATACCTGTCCACAAATTCTTGAAGAGCCTTGATTATTCATATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACCGAAGATGCTGCAGATCGAAGAATCACAGGATTAATTATTGGGATTAATGATGTTGATCCTGTCAGATGGCCCGGATCAAAATGGAGATGCCTGCTGGTAAGGTGGGATGACTTAGAAACCACACGGCATAACAGGGTTTCTCCATGGGAGATTGAGCCATCAGGTTCTGCTTCCACTGCCAGTAGCCTGATGACAGCTGGTTTGAAGAGGAGCAAGATTGGATTGCCTTCAGCACAGCTAGAATTTCCAGTTCCCAATGGGATCAGTACATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATAATCCTGTCAATGGTATTAATGCTCAGTGTCACCAATTATCGGAACTAAGAAGGTGCTATCCTGGATTTACCACAGCAGGACATGGTACAGTCCCACAAGTGAGTTCCGATGCTTCCTGCAATGGCATAGGCTTTGGTGAATCTTTCCGATTCCAAAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAATGGTCGCCTCGGAGCTTTTGATGGTTACCAGATGCTAAGGTCCAGAAATGGATGGTCTGCGCATATGAATAGCAATTCTTCTCATTTGCATGCACCCTTTCCATCTGGTCAACTCTCATCTCCATCATCCGTGTTGATGTTCCAGCAAGCATTTAATCCAGTTTCAAACTCTGATTATAGCAACAAAGCTAATCAGGTGAAGGGTGGTAAAGCACTTCAACGAGGTTCATATGCTTCTGAAGTTGATGGTGGAACGAATGCTTCCTTCCCATCTTATGAGACAACTTTCCATGGGAAAGCTCAGGAAGGAAAAAATTCTTTCACTTTTTTAAATCTGCATGATCAGTTGGGTGGTAGTCCACGTTCACCTGATTCAAGATCAGAGCCGAGAGGAAGTCAAGAGCTGGTTTCTTCATGTAAAAGCAACTGCAGAGTCTTTGGTTTTTCACTAACCGAGGGTGCTCCCGTTGCAAATGAAGAGACTGACCCCTCTACAGTCACTTTTCAATTAAATTCTGGGCCTTCTTTTACAAGACATTGCCAATGA 2088 0.4607 MAGLIDLNTTEDDETPSYGSYAASPSSSSSHSGTSTASVSASAPVVPGSSSNSVCLELWHACAGSMISLPKKGTLVVYFPQGHSEQQLHDFPLSNNNNSIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENEEGDIEADGEEEDTDAVMKATTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSAFVNKKQLVSGDAVLFLRGADGELRLGIRRAGQLKSDGKFSVLPHQQLNHSTPVEVINALSSRCAFSVHYNPRVSSSDFIIPVHKFLKSLDYSYSVGMRFRMRFETEDAADRRITGLIIGINDVDPVRWPGSKWRCLLVRWDDLETTRHNRVSPWEIEPSGSASTASSLMTAGLKRSKIGLPSAQLEFPVPNGISTSDFGESLRFQKVLQGQEILGVNNPVNGINAQCHQLSELRRCYPGFTTAGHGTVPQVSSDASCNGIGFGESFRFQKVLQGQEILPSQPYGNGRLGAFDGYQMLRSRNGWSAHMNSNSSHLHAPFPSGQLSSPSSVLMFQQAFNPVSNSDYSNKANQVKGGKALQRGSYASEVDGGTNASFPSYETTFHGKAQEGKNSFTFLNLHDQLGGSPRSPDSRSEPRGSQELVSSCKSNCRVFGFSLTEGAPVANEETDPSTVTFQLNSGPSFTRHCQ* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3121 695 MobiDBLite consensus disorder prediction 670 695 - -
Ahy3g3121 695 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 46 681 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy3g3121 695 MobiDBLite consensus disorder prediction 1 43 - -
Ahy3g3121 695 SUPERFAMILY DNA-binding pseudobarrel domain 152 274 IPR015300 -
Ahy3g3121 695 Gene3D - 156 259 IPR015300 -
Ahy3g3121 695 Gene3D - 321 395 - -
Ahy3g3121 695 PANTHER AUXIN RESPONSE FACTOR 46 681 - -
Ahy3g3121 695 MobiDBLite consensus disorder prediction 672 695 - -
Ahy3g3121 695 MobiDBLite consensus disorder prediction 10 43 - -
Ahy3g3121 695 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Ahy3g3121 695 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Ahy3g3121 695 SMART B3_2 158 260 IPR003340 GO:0003677
Ahy3g3121 695 MobiDBLite consensus disorder prediction 625 648 - -
Ahy3g3121 695 CDD B3_DNA 156 258 IPR003340 GO:0003677
Ahy3g3121 695 Pfam Auxin response factor 285 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3121 Ahy-Chr3 128717739 128723437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3121 157 509 B3 DNA Binding Superfamily AT2G33860 60.282 8.32e-146 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy3g3121 B3 8.50E-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3121 K14486 - gmx:100808119 968.378