Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3115 ATGCTAAAGAAAAAGTTGGATGAATTGATATTATTGGTTGGCACAGGAGTAAGCAAAGATGGACAAGTGCGTCACTTCTTTCACAGGCCTTCAAAAGCATACACAACGGGAACAAGGAAGAGAAGAAAGGTTCACACCGACCAAGAAGGAAGCGAGACTAGGTGGCACAAAACTGGCAAAACCAGACCCATCTCTGTGGCTGGTTCCGTTAAGGGTTTCAAGAAGATTCTTGTTCTCTACACCAACTATGGCAGGCAGAAGAAGCCCGAGAAGACCAACTGGGTCATGCATCAGTACCATCTCGGCTCCAACGAAGAAGAGAAAGACGGCGAGCTCGTCGTTTCTAAGGTTTTCTATCAAACACAGCCTCGACAATGTGCAAATAAGGATCCTTATGATGAAAGATTATTGATGACTTCACAAATCAACAGTGTCAATGACATTAGCATGCACGCACTACCCAAGAACAATGCAGGTTTTGTGGATTATTATAACCCCGGTTTCATGAATATGAATTATGAACAGATGAACGAGACTACCTCACCGCAACTGATTCCGAATATGGTGGTGCAAGGTGACAGCTCTTCTTTCATTCGGTTAGCCATGGATGCAAACAAACCCAGGTTGGACAGAAAGTAG 639 0.4413 MLKKKLDELILLVGTGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDQEGSETRWHKTGKTRPISVAGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCANKDPYDERLLMTSQINSVNDISMHALPKNNAGFVDYYNPGFMNMNYEQMNETTSPQLIPNMVVQGDSSSFIRLAMDANKPRLDRK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3115 212 MobiDBLite consensus disorder prediction 34 61 - -
Ahy3g3115 212 Gene3D NAC domain 7 124 IPR036093 GO:0003677|GO:0006355
Ahy3g3115 212 ProSiteProfiles NAC domain profile. 1 120 IPR003441 GO:0003677|GO:0006355
Ahy3g3115 212 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 16 196 IPR044799 GO:0003700
Ahy3g3115 212 Pfam No apical meristem (NAM) protein 18 101 IPR003441 GO:0003677|GO:0006355
Ahy3g3115 212 SUPERFAMILY NAC domain 18 120 IPR036093 GO:0003677|GO:0006355
Ahy3g3115 212 MobiDBLite consensus disorder prediction 40 59 - -
Ahy3g3115 212 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 16 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3115 Ahy-Chr3 128626471 128627507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3115 16 206 NAC Transcription Factor Family AT1G28470 62.176 3.39e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g3115 NAM 3.80E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3115 - - ahf:112782360 437.187