Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3092 ATGGAGGAGATTTCAACTTCAACTTCAGCTTCAGCTTCAGCATCAGGGTACAAGGAATATGTGGCAGGTTTGATCGCTGGCGTTGCCACTGTTGCCATTGGCCATCCATTTGACACCGTCAAGGTGAAACTGCAAAAGCACAACACAGGACAACATGTGGTTCGCTATAGAAGTGGATTGCATTGCACCACTAGGATACTGAAGACTGAAGGCATCAAAGGACTATATAGAGGAGCAACATCATCTTTTCTCGGGATGGCTTTTGAAAGTTCACTTCTTTTTGGCATATATTCCCAGACAAAATTGGCCCTTCAGGGAGGTGTTCAAAGTGGTGAACCGCAGCCTCAAGTGATAATACCATCTGCAGCTTATGGTGGTGCCATCATCAGTTTTGTGTTATGTCCGACGGAGCTGGTAAAGTGTAGGATGCAGATTCAAGGGACTGACTCTTTGGTTCCGAAGTCCAGTAGATACAGTAGTCCTCTTGATTGTGCCCTTAAAACCGTGAAAAGTGAAGGGGTGACAGGAATTTTTCGTGGAGGCTTTACAACATTGCTTAGAGAATCAATAGGGAATGCTGTCTTTTTCAGCACATATGAATACGTACGCTATCACCTGCATTCACATGCCAAAGCTGTTCGTTCCAATTACAATAACCTGGTTGATATTGGAATTGGGATTATTACCGGAGGTCTTGGTGGTGTGTCTTTTTGGTTGGCGGTTCTGCCCCTTGATGTGGCAAAGACTTTAATTCAGACAAACCCGGAAAAAAACTGTTCACGAAATCCTTTTCAGGTGCTGAGTTCGGTTTACAGGAGCGGTGGATTGAAGGGGTGTTATACAGGTCTGGGGCCTACAGTAACCCGAGCATTTCCTGCTAATGCAGCAGCAATTGTGACCTGGGAGCTAGCAATGAAAATGTTAGGCATTAGGCACGACTGA 942 0.4522 MEEISTSTSASASASGYKEYVAGLIAGVATVAIGHPFDTVKVKLQKHNTGQHVVRYRSGLHCTTRILKTEGIKGLYRGATSSFLGMAFESSLLFGIYSQTKLALQGGVQSGEPQPQVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKSEGVTGIFRGGFTTLLRESIGNAVFFSTYEYVRYHLHSHAKAVRSNYNNLVDIGIGIITGGLGGVSFWLAVLPLDVAKTLIQTNPEKNCSRNPFQVLSSVYRSGGLKGCYTGLGPTVTRAFPANAAAIVTWELAMKMLGIRHD* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3092 313 PANTHER - 13 140 - -
Ahy3g3092 313 Pfam Mitochondrial carrier protein 121 207 IPR018108 -
Ahy3g3092 313 Pfam Mitochondrial carrier protein 17 105 IPR018108 -
Ahy3g3092 313 Pfam Mitochondrial carrier protein 227 308 IPR018108 -
Ahy3g3092 313 Gene3D Mitochondrial carrier domain 3 122 IPR023395 -
Ahy3g3092 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 307 IPR018108 -
Ahy3g3092 313 PANTHER - 140 312 - -
Ahy3g3092 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 205 IPR018108 -
Ahy3g3092 313 Gene3D Mitochondrial carrier domain 123 313 IPR023395 -
Ahy3g3092 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 103 IPR018108 -
Ahy3g3092 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 140 312 - -
Ahy3g3092 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 13 140 - -
Ahy3g3092 313 SUPERFAMILY Mitochondrial carrier 16 302 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3092 Ahy-Chr3 128283948 128288405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3092 34 308 Antiporters AT1G79900 29.643 1.86e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3092 K15109 - qsu:112032455 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3358 13 130704907 130709224 Ahy3g3092 3 128283948 128288405 hybridization