LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy3g3055	ATGCCTAACCGACAAAAGAGGCCGAGGGCCGAGACACAGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCACGTTGCATTCTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCGGGCCATCGGAAGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGTAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAGTCGTTGACGGTGATGGCGTATTGCAACACTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACGTTTACCTTTCACCTCTTGTAGTATTCTCCGATGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAGCAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACTGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCCAGAGGCTCACCATCGACTCTGCACTTGGCATCTACTCCGAAACGCCACGAGCAACATTGGAAAGCCCAAATTCACCAGGATGTTTAAGGATTGCATGCTCAGCGACTACGAGGTCCGAACATTTCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTGGCCGATAAAAGATAG	912	0.5033	MPNRQKRPRAETQCGCPARMLLRMDDESGRWHVAFFSDAHNHHVLELRFSSMLPGHRKMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKANDPALYYKEVVDGDGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVVFSDVNHHNQTVVFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCTWHLLRNATSNIGKPKFTRMFKDCMLSDYEVRTFQRKWFEMVEKFGVADKR*	304

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy3g3055	303	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	4	301	IPR031052	GO:0006355
	Ahy3g3055	303	Pfam	MULE transposase domain	165	259	IPR018289	-
	Ahy3g3055	303	Pfam	FAR1 DNA-binding domain	4	45	IPR004330	-
	Ahy3g3055	303	PANTHER	OS02G0262500 PROTEIN	4	301	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy3g3055	Ahy-Chr3	127722569	127723480	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Ahy3g3055		MULE	6.90E-30	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy3g3055	-		-	ahf:112701185	612.068